2018 :

Veron V., Marandel L.L., Liu J., Velez E.J., Lepais O., Panserat S., Skiba S., and Seiliez I.. DNA methylation of the promoter region of bnip3 and bnip3l genes induced by metabolic programming. BMC Genomics, 19(1):np, 2018. doi: ⟨10.1186/s12864-018-5048-4⟩ Vincent Veron and Lucie Marandel contributed equally to this work.

Libor Zavorka, Mathieu Buoro, and Julien Cucherousset. The negative ecological impacts of a globally introduced species decrease with time since introduction. Global Change Biology, page 10 p., 2018. doi: 10.1111/gcb.14323. URL https://hal.archives-ouvertes.fr/hal-01855437.

Matthias VIGNON. Short-term stress for long-lasting otolith morphology – brief embryological stress disturbance can reorient otolith ontogenetic trajectory. Canadian Journal of Fisheries and Aquatic Sciences, pages 1–10, 2018. doi: 10.1139/cjfas-2017-0110. URL https://hal.archives-ouvertes. fr/hal-01855436.

Bouchard C., Bardonnet, A, Buoro, M, & C. Tentelier. Effects of spatial aggregation of nests on population recruitment: the case of a small population of Atlantic salmon. Ecosphere, 2018, 9(4):e02178. DOI: 10.1002/ecs2.2178

T. A. C. Gordon, H. R. Harding, F. K. Clever, I. K. Davidson, W. Davison, et al.. Fishes in a changing world: learning from the past to promote sustainability of fish populations. Journal of Fish Biology, Wiley, 2018, 92 (3), pp.804-827. 〈10.1111/jfb.13546〉. 〈hal-01753931〉

Cécile F.E. Bacles, Colin Bouchard, Frédéric Lange, Aurélie Manicki, Cédric Tentelier, et al.. Estimating the effective number of breeders from single parr samples for conservation monitoring of wild populations of Atlantic salmon Salmo salar. Journal of Fish Biology, Wiley, 2018, pp. online first. 〈10.1111/jfb.13537〉. 〈hal-01716615〉

Elorri Arevalo, Stephane Panserat, Iban Seiliez, A. Larrañaga, Agnes Bardonnet. Effect of food shortage and temperature on age 0+ salmonids: A contribution to predict the effects of climate change. Journal of Fish Biology, Wiley, 2018, 11 p. 〈10.1111/jfb.13533〉. 〈hal-01705840〉

Marc Jarry, Edward Beall, Patrick Davaine, Francois Gueraud, Philippe Gaudin, et al.. Sea trout (Salmo trutta) growth patterns during early steps of invasion in the Kerguelen Islands. Polar Biology, Springer Verlag, 2018, pp. online first. 〈10.1007/s00300-018-2253-1〉. 〈hal-01705841〉

Adam M. Siepielski, Michael B. Morrissey, Mathieu Buoro, Stephanie M. Carlson, Christina M. Caruso, et al.. Response to comment on « Precipitation drives global variation in natural selection ». Science, American Association for the Advancement of Science, 2018, 359 (6374), 2 p. 〈10.1126/science.aan5760〉. 〈hal-01705843〉

Lucie Marandel, Philippe Gaudin, Francois Gueraud, Stéphane Glise, Alexandre Herman, et al.. A reassessment of the carnivorous status of salmonids : hepatic glucokinase is expressed in wild fish in Kerguelen Islands. Science of the Total Environment, Elsevier, 2018, 612, pp.276-285. 〈10.1016/j.scitotenv.2017.08.247〉. 〈hal-01607554〉

Masson, S., Lepais, O., Manicki, A., Prévost, E., Chat, J. (2018). Disentangling individual movement between populations from effective dispersal in the facultative anadromous Salmo trutta L. Ecology of Freshwater Fish, 27 (1), 323-338. DOI : 10.1111/eff.12349

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2017 :

Marchand, F., Beaulaton, L., Prévost, E., Delanoë, R., Destouches, J. P., Gueraud, F., … & Rives, J. (2017). Abundance indices and biological traits of juvenile salmon (Salmo salar) sampled in three rivers on the Atlantic and Channel coasts (France). Biodiversity data journal, (5).

Bolliet, V., Labonne J., Olazcuaga, L., Panserat, S., Seiliez, I. (2017). Modeling of autophagy-related gene expression dynamics during long term fasting in European eel (Anguilla anguilla). Scientific Reports 7: 17896. DOI:10.1038/s41598-017-18164-6

Raffard, A., Lecerf, A., Cote, J., Buoro, M., Lassus, R., & Cucherousset, J. (2017). The functional syndrome: linking individual trait variability to ecosystem functioning. Proc. R. Soc. B, 284:1868. DOI: 10.1098/rspb.2017.1893

Ripple, W. J., Wolf, C., Newsome, T. M., Galetti, M., Alamgir, M., Crist, E., … & 15,364 scientist signatories from 184 countries. (2017). World Scientists’ Warning to Humanity: A Second Notice. BioScience, 67(12), 1026-1028.

Jatteau, P., Drouineau, Charles, Carry, L., Lange, F., Lambert (2017). Thermal tolerance of allis shad (Alosa alosa) embryos and larvae: Modeling and potential applications. Aquatic Living Resources, 30 (2), 8 p. DOI : 10.1051/alr/2016033

Hwan, J. L., Fernández-Chacón, A., Buoro, M., Carlson, S. M. (2017). Dry season survival of juvenile salmonids in an intermittent coastal stream. Canadian Journal of Fisheries and Aquatic Sciences, online first. DOI : 10.1139/cjfas-2017-0026

Vivancos, A., Closs, G., Tentelier, C. (2017). Are 2D space-use analyses adapted to animals living in 3D environments? A case study on a fish shoal. Behavioral Ecology, 28 (2), 485-493. DOI : 10.1093/beheco/arw175

Vignon, M. (2017). Investigating morphospace occupation in multi-scale ecological and evolutionary data using regression tree: case studies and perspectives. Evolutionary Biology, 44 (1), 120-134. DOI : 10.1007/s11692-016-9386-3

Gauthey, Z., Tentelier, C., Lepais, O., Elosegi, A., Royer, L., Glise, S., Labonne, J. (2017). With our powers combined: integrating behavioral and genetic data to estimate mating success and sexual selection. Rethinking Ecology, 2, 1-26. DOI : 10.3897/rethinkingecology.2.14956

Siepielski, A. M., Morrissey, M. B., Buoro, M., Carlson, Caruso, C. M., Clegg, S. M., Coulson, T., DiBattista, J., Gotanda, K. M., Francis, C. D., Hereford, J., Kingsolver, J. G., Augustine, Kruuk, L. E. B., Martin, R. A., Sheldon, B. C., Sletvold, N., Svensson, E. I., Wade, M. J., MacColl, A. D. C. (2017). Precipitation drives global variation in natural selection. Science, 355 (6328), 959-962. DOI : 10.1126/science.aag2773

Jacquin, L., Dybwad, C., Rolshausen, Hendry, A. P., Reader, S. M. (2017). Evolutionary and immediate effects of crude-oil pollution: depression of exploratory behaviour across populations of Trinidadian guppies. Animal Cognition, 20 (1), 97-108. DOI : 10.1007/s10071-016-1027-9

Gauthey, Z., Lang, M., Elosegi, A., Tentelier, C., Rives, J., Labonne, J. (2017). Brown trout spawning habitat selection and its effects on egg survival. Ecology of Freshwater Fish, 26 (1), 133-140. DOI : 10.1111/eff.12262

Lepais, O., Manicki, A., Glise, S., Buoro, M., Bardonnet, A. (2017). Genetic architecture of threshold reaction norms for male alternative reproductive tactics in Atlantic salmon (Salmo salar L.). Scientific Reports, 7 (43552). DOI : 10.1038/srep43552

Jacquin, L., Gauthey, Z., Roussille, V., Le Hénaff, M., Tentelier, C., Labonne, J. (2017). Melanin in a changing world: brown trout coloration reflects alternative reproductive strategies in variable environments. Behavioral Ecology, 28 (6), 1423-1434. DOI : 10.1093/beheco/arx102

Tentelier, C., Barroso-Gomila, O., Lepais, O., Manicki, A., Romero Garmendia, I., Jugo, B. (2017). Testing mate choice and overdominance at MH in natural families of Atlantic salmon Salmo salar. Journal of Fish Biology, 90 (4), 1644-1659. DOI : 10.1111/jfb.13260

Elosegi, A., Díez, J. R., Flores, L., Molinero, J. (2017). Pools, channel form, and sediment storage in wood-restored streams: potential effects on downstream reservoirs. Geomorphology, 279, 165-175. DOI : 10.1016/j.geomorph.2016.01.007

Pastor, A., Lupon, A., Gomez-Gener, L., Rodriguez-Castillo, T., Abril, M., Arce, M. I., Aristi, I., Arroita, M., Bravo, A., De Castro-Catala, N., Del Campo, R., Casa-Ruiz, J. P., Estevez, E., Fernandez, D., Fillol, M., Flores, L., Freixa, A., Gimenez-Grau, P., Gonzalez-Ferreras, A., Hernandez-del Amo, E., Martin, E., Martinez, A., Monroy, S., Mora-Gomez, J., Palacin-Lizarbe, C., Pereda, O., Poblador, S., Rasines-Ladero, R., Reyes, M., Rodriguez-Lozano, P., Ruiz, C., Sanpera-Calbet, I., Solagaistua, L., Tornero, I., Catalan, N. (2017). Local and regional drivers of headwater streams metabolism : insights from the first AIL collaborative project. Limnetica, 36 (1), 67-85. DOI : 10.2381/limn.36.06

Bolliet, V., Claveau, J., Jarry, M., Gonzalez, P., Baudrimont, Monperrus, M. (2017). Migratory behavior, metabolism, oxidative stress and mercury concentrations in marine and estuarine European glass eels (Anguilla anguilla). Physiology and Behavior, 169, 33-40. DOI : 10.1016/j.physbeh.2016.11.008

Arroita, M., Flores, L., Larrañaga, Martínez, Martínez-Santos, M., Pereda, Ruiz-Romera, Solagaistua, Elosegi (2017). Water abstraction impacts stream ecosystem functioning via wetted-channel contraction. Freshwater Biology, 62 (2), 243-257. DOI : 10.1111/fwb.12864

Marengo, M., Baudouin, M., Viret, A., Laporte, M., Berrebi, Vignon, M., Marchand, B., Durieux, E. (2017). Combining microsatellite, otolith shape and parasites community analyses as a holistic approach to assess population structure of Dentex dentex. Journal of Sea Research, 128, 1-14. DOI : 10.1016/j.seares.2017.07.003

Dauphin, G., Brugel, C., Legrand, M., Prévost, E. (2017). Separating wild versus stocking components in fish recruitment without identification data: a hierarchical modelling approach. Canadian Journal of Fisheries and Aquatic Sciences, 74 (7), 1111-1124. DOI : 10.1139/cjfas-2015-0443

Bal, G., Montorio, L., Rivot, E., Prévost, E., Baglinière, J.-L., Nevoux, M. (2017). Evidence for long-term change in length, mass and migration phenology of anadromous spawners in French Atlantic salmon Salmo salar . Journal of Fish Biology, 90 (6), 2375-2393. DOI : 10.1111/jfb.13314

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2016 :

Tentelier, C., Larranaga, N., Lepais, O., Manicki, A., Rives, J., Lange, F. (2016). Space use and its effects on reproductive success of anadromous Atlantic salmon. Canadian Journal of Fisheries and Aquatic Sciences, 73 (10), 1461-1471. DOI : 10.1139/cjfas-2015-0518

Gauthey, Z., Hendry, A. P., Elosegi, A., Tentelier, C., Labonne, J. (2016). The context dependence of assortative mating: a demonstration with conspecific salmonid populations. Journal of Evolutionary Biology, 29 (9), 1827-1835. DOI : 10.1111/jeb.12914

Geffroy, B., Guilbaud, F., Amilhat, E., Beaulaton, L., Vignon, M., Huchet, E., Rives, J., Bobe, J., Fostier, A., Guiguen, Y., Bardonnet, A. (2016). Sexually dimorphic gene expressions in eels: useful markers for early sex assessment in a conservation context. Scientific Reports, 6, 1-11. DOI : 10.1038/srep34041

Geffroy, B., Bolliet, V., Bardonnet, A. (2016). Kleptoparasitism and aggressiveness are influenced by standard metabolic rate in eels. Physiology and Behavior, 157, 165-169. DOI : 10.1016/j.physbeh.2016.01.046

Aymes, J.-C., Vignon, M., Beall, E., Gueraud, F., Gaudin, P. (2016). Age validation of the Kerguelen Islands brown trout, Salmo trutta L., and selection of the otolith optimal zone for investigating chronological data series. Fisheries Research, 176, 22-29. DOI : 10.1016/j.fishres.2015.11.025

Teichert, N., Valade, P., Fostier, A., Grondin, H., Gaudin, P. (2016). Reproductive biology of an endemic amphidromous goby, Cotylopus acutipinnis, from La Réunion Island. Marine and Freshwater Research, 67 (4), 526-536. DOI : 10.1071/MF14264

Teichert, N., Valade, P., Grondin, H., Trichet, E., Sardenne, F., Gaudin, P. (2016). Pelagic larval traits of the amphidromous goby Sicyopterus lagocephalus display seasonal variations related to temperature in La Reunion Island. Ecology of Freshwater Fish, 25 (2), 234-247. DOI : 10.1111/eff.12205

Geffroy, B., Bardonnet, A. (2016). Sex differentiation and sex determination in eels : consequences for management. Fish and Fisheries, 17 (2), 375-398. DOI : 10.1111/faf.12113

Labonne, J., Kaeuffer, R., Gueraud, F., Zhou, M., Manicki, A., Hendry, A. P. (2016). From the bare minimum : genetics and selection in populations founded by only a few parents. Evolutionary Ecology Research, 17 (1), 21-34.

Gil, J., Caudron, A., Labonne, J. (2016). Can female preference drive intraspecific diversity dynamics in brown trout (Salmo trutta, L.)?. Ecology of Freshwater Fish, 25 (3), 352-359. DOI : 10.1111/eff.12215

Marandel, L., Lepais, O., Arbenoits, E., Veron, V., Dias, K., Zion, M., Panserat, S. (2016). Remodelling of the hepatic epigenetic landscape of glucose-intolerant rainbow trout (Oncorhynchus mykiss) by nutritional status and dietary carbohydrates. Scientific Reports, 6, 12 p. DOI : 10.1038/srep32187

Tentelier, C., Aymes, J.-C., Spitz, B., Rives, J. (2016). Using proximity loggers to describe the sexual network of a freshwater fish. Environmental Biology of Fishes, 99 (8-9), 621-631. DOI : 10.1007/s10641-016-0504-y

Flores, L., Bailey, R. A., Elosegi, A., Larrañaga, Reiss, J. (2016). Habitat Complexity in Aquatic Microcosms Affects Processes Driven by Detritivores. Plos One, 11 (11), e0165065. DOI : 10.1371/journal.pone.0165065

Tentelier, C., Lepais, O., Larranaga, N., Manicki, A., Lange, F., Rives, J. (2016). Sexual selection leads to a tenfold difference in reproductive success of alternative reproductive tactics in male Atlantic salmon. Naturwissenschaften, 103 (5-6), 13 p. DOI : 10.1007/s00114-016-1372-1

Jacquin, L., Reader, S. M., Boniface, A., Mateluna, Patalas, Pérez-Jvostov, F., Hendry, A. P. (2016). Parallel and nonparallel behavioural evolution in response to parasitism and predation in Trinidadian guppies. Journal of Evolutionary Biology, 29 (7), 1406-1422. DOI : 10.1111/jeb.12880

Gauthey, Z., Panserat, S., Elosegi, A., Herman, A., Tentelier, C., Labonne, J. (2016). Experimental evidence of population differences in reproductive investment conditional on environmental stochasticity. Science of the Total Environment, 541, 143-148. DOI : 10.1016/j.scitotenv.2015.09.69

Gil, J., Labonne, J., Caudron, A. (2016). Evaluation of strategies to conserve and restore intraspecific biodiversity of brown trout: outcomes from genetic monitoring in the French Alps. Reviews in Fish Biology and Fisheries, 26 (1), 1-11. DOI : 10.1007/s11160-015-9405-y

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2015 :

Legrand, M., Prévost, E. (2015). Amélioration des conditions de franchissement à Poutès. Paroles de Migrateurs (11), 3-4.

Vuillaume, B., Valette, V., Lepais, O., Grandjean, F., Breuil, M. (2015). Genetic evidence of hybridization between the endangered native species Iguana delicatissima and the invasive Iguana iguana (Reptilia, Iguanidae) in the Lesser Antilles: management Implications. Plos One, 10 (6). DOI : 10.1371/journal.pone.0127575

Claveau, J., Monperrus, M., Jarry, M., Pinaly, H., Baudrimont, M., Gonzalez , P., Amouroux, D., Bardonnet, A., Bolliet, V. (2015). Spatial and seasonal variations of methylmercury in European glass eels (Anguilla anguilla) in the Adour estuary (France) and relation to their migratory behaviour. Environmental Science and Pollution Research, 22 (14), 10721-10732. DOI : 10.1007/s11356-015-4303-3

Vignon, M. (2015). Extracting environmental histories from sclerochronological structures — Recursive partitioning as a mean to explore multi-elemental composition of fish otolith. Ecological Informatics, 30, 159-169. DOI : 10.1016/j.ecoinf.2015.10.002

Buzatto, B. A., Buoro, M., Hazel, W. N., Tomkins, J. L. (2015). Investigating the genetic architecture of conditional strategies using the environmental threshold model. Proceedings of the Royal Society. B, Biological Sciences, 282 (1821), 10 p. DOI : 10.1098/rspb.2015.2075

Gauthey, Z., Freychet, M., Manicki, A., Herman, A., Lepais, O., Panserat, S., Elosegi, A., Tentelier, C., Labonne, J. (2015). The concentration of plasma metabolites varies throughout reproduction and affects offspring number in wild brown trout (Salmo trutta). Comparative Biochemistry and Physiology. Part A, Molecular and Integrative Physiology, 184, 90-96. DOI : 10.1016/j.cbpa.2015.01.025

Geffroy, B., Sadoul, B., Bardonnet, A. (2015). Behavioural syndrome in juvenile eels and its ecological implications. Behaviour, 152 (2), 147-166. DOI : 10.1163/1568539X-00003236

Galipaud, M. (Auteur de correspondance), Gauthey, Z., Turlin, J., Bollache, L., Lagrue, C. (2015). Mate choice and male-male competition among morphologically cryptic but genetically divergent amphipod lineages. Behavioral Ecology and Sociobiology, 69 (12), 1907-1916. DOI : 10.1007/s00265-015-2003-0

Antonecchia, G., Fortini, P., Lepais, O., Gerber, S., Léger, P., Scippa, G. S., Viscosi, V. (2015). Genetic structure of a natural oak community in central Italy: Evidence of gene flow between three sympatric white oak species (Quercus, Fagaceae). Annals of Forest Research, 58 (2), 205-216. DOI : 10.15287/afr.2015.415

Vignon, M. (2015). Disentangling and quantifying sources of otolith shape variation across multiple scales using a new hierarchical partitioning approach. Marine Ecology Progress Series, 534, 163-177. DOI : 10.3354/meps11376

Régnier, T., Labonne, J., Chat, J., Yano, A., Guiguen, Y., Bolliet, V. (2015). No early gender effects on energetic status and life history in a salmonid. Royal Society Open Science, 2 (12), 1-8. DOI : 10.1098/rsos.150441

Perga, M.-E., Prévost, E., Baglinière, J.-L. (2015). Préserver la richesse des milieux aquatiques. Pour la Science, 22-25.

Claveau, J., Monperrus, M., Jarry, M., Baudrimont, M., Gonzalez, P., Cavalheiro, J., Mesmer-Dudons, N., Bolliet, V. (2015). Methylmercury effects on migratory behaviour in glass eels (Anguilla anguilla) : an experimental study using isotopic tracers. Comparative Biochemistry and Physiology. Toxicology and Pharmacology, 171, 15-27. DOI : 10.1016/j.cbpc.2015.03.003

Piou, C., Taylor, M. H., Papaix, J., Prévost, E. (2015). Modelling the interactive effects of selective fishing and environmental change on Atlantic salmon demogenetics. Journal of Applied Ecology, 52 (6), 1629-1637. DOI : 10.1111/1365-2664.12512

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2014 :

Chatelain, M., Gasparini, J., Jacquin, L., Frantz, A. (2014). The adaptive function of melanin-based plumage coloration to trace metals. Biology Letters, 10 (3). DOI : 10.1098/rsbl.2014.0164

D’Elbée, J., Lalanne, Y., Castege, I., Bru, N., D’Amico, F. (2014). Response of planktonic cladocerans (Class: Branchiopoda) to short-term changes in environmental variables in the surface waters of the Bay of Biscay. Deep Sea Research Part 2, 106, 87-98. DOI : 10.1016/j.dsr2.2013.09.030

Teichert, N., Valade, P., Fostier, A., Lagarde, R., Gaudin, P. (2014). Reproductive biology of an amphidromous goby, Sicyopterus lagocephalus, in La Réunion Island. Hydrobiologia, 726 (1), 123-141. DOI : 10.1007/s10750-013-1756-6

Perrier, C., Le Gentil, J., Ravigné, V., Gaudin, P., Salvado, J.-C. (2014). Origins and genetic diversity among Atlantic salmon recolonizing upstream areas of a large South European river following restoration of connectivity and stocking. Conservation Genetics, 15 (5), 1095-1109. DOI : 10.1007/s10592-014-0602-3

Massiot-Granier, F., Prévost, E., Chaput, G., Potter, T., Smith, G., White, J., Mäntyniemi, S., Rivot, E. (2014). Embedding stock assessment within an integrated hierarchical Bayesian life cycle modelling framework : an application to Atlantic salmon in the Northeast Atlantic. ICES Journal of Marine Science, 71 (7), 1653-1670. DOI : 10.1093/icesjms/fst240

Cattaneo, F., Grimardias, D., Carayon, M., Persat, H., Bardonnet, A. (2014). A multidimensional typology of riverbank habitats explains the disribution of European grayling (thymallus thymallus L.) fry in a temperate river. Ecology of Freshwater Fish, 23 (4), 527-543. DOI : 10.1111/eff.12106

Lepais, O. (Auteur de correspondance), Bacles, C. F. E. (2014). Two are better than one: combining landscape genomics and common gardens for detecting local adaptation in forest trees. Molecular Ecology, 23 (19), 4671-4673. DOI : 10.1111/mec.12906

Gouraud, V., Baran, P., Bardonnet, A., Beaufrère, C., Capra, H., Caudron, A., Delacoste, M., Lascaux, J., Naura, M., Ovidio, M., Poulet, N., Tissot, L., Sabaton, C., Baglinière, J.-L. (2014). Sur quelles connaissances se baser pour évaluer l’état de santé des populations de truite commune (Salmo trutta) ?. Hydroécologie Appliquée, 18, 111-138. DOI : 10.1051/hydro/2014001

Bal, G., Rivot, E., Baglinière, J.-L., White, J., Prévost, E. (2014). A hierarchical bayesian model to quantify uncertainty of stream water temperature forecasts. Plos One, 9 (12), e115659. DOI : 10.1371/journal.pone.0115659

Teichert, N., Valade, P., Lim, P., Dauba, F., Labonne, J., Richarson, M., Bosc, P., Gaudin, P. (2014). Habitat selection in amphidromous Gobiidae of Reunion Island : Sicyopterus lagocephalus (Pallas, 1770) and Cotylopus acutipinnis (Guichenot, 1863). Environmental Biology of Fishes, 97 (3), 255-266. DOI : 10.1007/s10641-013-0148-0

Gasmi, S., Ferval, M., Pelissier, C., D’Amico, F., Maris, T., Tackx, M., Legal, L. (2014). Genetic diversity among the Eurytemora affinis species complex in the Scheldt estuary and its tributaries using ISSR-PCR marker assay. Estuarine Coastal and Shelf Science, 145, 22-30. DOI : 10.1016/j.ecss.2014.04.005

Lepais, O., Weir, J. T. (2014). SimRAD: an R package for simulation-based prediction of the number of loci expected in RADseq and similar genotyping by sequencing approaches. Molecular Ecology Resources, 14 (6), 1314-1321. DOI : 10.1111/1755-0998.12273

Geffroy, B., Bru, N., Dossou-Gbete, S., Tentelier, C., Bardonnet, A. (2014). The link between social network density and rank-order consistency of aggressiveness in juvenile eels. Behavioral Ecology and Sociobiology, 68 (7), 1073-1083. DOI : 10.1007/s00265-014-1719-6

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2013 :

Navarro, P., Clemens, S., Perrot, V., Bolliet, V., Tabouret, H., Guerin, T., Monperrus, M., Amouroux, D. (2013). Simultaneous determination of mercury and butyltin species using a multiple species-specific isotope dilution methodology on the European, Anguilla anguilla glass eel and yellow eel. International Journal of Environmental Analytical Chemistry, 93 (2), 166-182. DOI : 10.1080/03067319.2011.629349

Gaither, M. R., Aeby, G., Vignon, M., Meguro, Y.-i., Rigby, M., Runyon, C., Toonen, R. J., Wood, C. L., Bowen, B. W. (2013). An invasive fish and the time-lagged spread of its parasite across the Hawaiian archipelago. Plos One, 8 (2), 9 p.

Castege, I., Soulier, L., Hemery, G., Mouches, C., Lalanne, Y., Dewez, A., Pautrizel, F., d’Elbée, J., D’Amico, F. (2013). Exploring cetacean stranding pattern in light of variation in at-sea encounter rate and fishing activity : lessons from time surveys in the south Bay of Biscay (East-Atlantic; France). Journal of Marine Systems, 109-110, S284-S292. DOI : 10.1016/j.jmarsys.2012.04.007

Magda, D. (Auteur de correspondance), Gleizes, B., Jarry, M. (2013). Maternal effect on seed survival and emergence in Cytisus scoparius: an experimental approach. Ecological Research, 28 (6), 927-934. DOI : 10.1007/s11284-013-1075-4

Dodson, J., Sirois, P., Daigle, G., Gaudin, P., Bardonnet, A. (2013). Otolith microstructure during the early life-history stages of brown trout : validation and interpretation. North American Journal of Fisheries Management, 33 (1), 108-116. DOI : 10.1080/02755947.2012.746245

Dauphin, G., Brugel, C., Hoffmann-Legrand, M., Prévost, E. (2013). Estimating spatial distribution of Atlantic salmon escapement using redd counts despite changes over time in counting procedure : application to the Allier River population. Ecology of Freshwater Fish, 22 (4), 626-636. DOI : 10.1111/eff.12067

Teichert, N., Keith, P., Valade, P., Richarson, M., Metzger, M., Gaudin, P. (2013). Breeding pattern and nest guarding in Sicyopterus lagocephalus, a widespread amphidromous Gobiidae. Journal of Ethology, 31 (3), 239-247. DOI : 10.1007/s10164-013-0372-2

Lepais, O., Muller, S. D., Ben Saad-Limam, S., Benslama, M., Rhazi, L., Belouahem-Abed, D., Daoud-Bouattour, A., Mokhtar Gammar, A., Ghrabi-Gammar, Z., Bacles, C. F. (2013). High genetic diversity and distinctiveness of rear-edge climate relicts maintained by ancient tetraploidisation for Alnus glutinosa. Plos One, 8 (9), 11 p. DOI : 10.1371/journal.pone.0075029

Geffroy, B., Guiguen, Y., Fostier, A., Bardonnet, A. (2013). New insights regarding gonad development in European eel : evidence for a direct ovarian differentiation. Fish Physiology and Biochemistry, 39 (5), 1129-1140. DOI : 10.1007/s10695-013-9769-7

Labonne, J., Vignon, M., Prévost, E., Lecomte, F., Dodson, J., Kaeuffer, R., Aymes, J.-C., Jarry, M., Gaudin, P., Davaine, P., Beall, E. (2013). Invasion dynamics of a fish-free landscape by brown trout (Salmo trutta). Plos One, 8 (8), 7 p. DOI : 10.1371/journal.pone.0071052

Régnier, T., Bolliet, V., Gaudin, P., Labonne, J. (2013). Bigger is not always better : egg size influences survival throughout incubation in brown trout (Salmo trutta). Ecology of Freshwater Fish, 22 (2), 169-177. DOI : 10.1111/eff.12018

Lepais, O. (Auteur de correspondance), Roussel, G., François, H., Kremer, A., Gerber, S. (2013). Strength and variability of postmating reproductive isolating barriers between four European white oak species. Tree Genetics and Genomes, 9 (3), 841-853. DOI : 10.1007/s11295-013-0602-3

TEICHERT, N., Valade, P., Bosc, P., Richarson, M., Gaudin, P. (2013). Spawning-habitat selection of an Indo-Pacific amphidromous gobiid fish, Sicyopterus lagocephalus (Pallas). Marine and Freshwater Research, 64 (11), 1058 – 1067. DOI : 10.1071/MF13035

Lecomte, F., Beall, E., Chat, J., Davaine, P., Gaudin, P. (2013). The complete history of salmonid introductions in the Kerguelen Islands, Southern Ocean. Polar Biology, 36 (4), 457-475. DOI : 10.1007/s00300-012-1281-5

Martin, J., Bareille, G., Berail, S., Pecheyran, C., Gueraud, F., Lange, F., Daverat, F., Bru, N., Beall, E., Barracou, D., Donard, O. (2013). Persistence of a southern Atlantic salmon population : diversity of natal origins from otolith elemental and Sr isotopic signatures. Canadian Journal of Fisheries and Aquatic Sciences, 70 (2), 182-197. DOI : 10.1139/cjfas-2012-0284

Piou, C., Prévost, E. (2013). Contrasting effects of climate change in continental vs. oceanic environments on population persistence and microevolution of Atlantic salmon. Global Change Biology, 19 (3), 711-723. DOI : 10.1111/gcb.12085

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2012 :

Vignon, M. (2012). Ontogenic trajectories of otolith shape during shift in habitat use : interaction between otolith growth and environment. Journal of Experimental Marine Biology and Ecology, 420-421, 26-32. DOI : 10.1016/j.jembe.2012.03.021

Geffroy, B., Bardonnet, A. (2012). Differential effects of behaviour, propensity to migrate and recruitment season on glass eels and elvers’growing performance. Ecology of Freshwater Fish, 21 (3), 469-482. DOI : 10.1111/j.1600-0633.2012.00566.x

Bried, J. T., D’Amico, F., Samways, M. J. (2012). A critique of the dragonfly delusion hypothesis : why sampling exuviae does not avoid bias. Insect Conservation and Diversity, 5, 398-402. DOI : 10.1111/j.1752-4598.2011.00171.x

Rotheray, E., Lepais, O., Nater, A., Krützen, M., Greminger, M., Goulson, D., Bussière, L. (2012). Genetic variation and population decline of an endangered hoverfly Blera fallax (Diptera : Syrphidae). Conservation Genetics, 13 (5), 1283-1291. DOI : 10.1007/s10592-012-0371-9

Régnier, T., Bolliet, V., Gaudin, P., Labonne, J. (2012). Female effects on offspring energetic status and consequences on early development in yolk feeding brown trout (Salmo trutta). Journal of Experimental Zoology. Part A, Ecological Genetics and Physiology, 317A (6), 347-358. DOI : 10.1002/jez.1728

Darvill, B., Lepais, O., Woodall, L., Goulson, D. (2012). Triploid bumblebees indicate a direct cost of inbreeding in fragmented populations. Molecular Ecology, 21 (16), 3988-3995. DOI : 10.1111/j.1365-294X.2012.05679.x

Acolas, M.-L., Labonne, J., Baglinière, J.-L., Roussel, J.-M. (2012). The role of body size versus growth on the decision to migrate : a case study with Salmo trutta. Naturwissenschaften, 99 (1), 11-21. DOI : 10.1007/s00114-011-0861-5

Buoro, M., Prévost, E., Gimenez, O. (2012). Digging through model complexity : using hierarchical models to uncover evolutionary processes in the wild. Journal of Evolutionary Biology, 25 (10), 2077-2090. DOI : 10.1111/j.1420-9101.2012.02590.x

Teichert, N., Richarson, M., Valade, P., Gaudin, P. (2012). Reproduction and marine life history of an endemic amphidromous gobiid fish of Reunion Island. Aquatic Biology, 15 (3), 225-236. DOI : 10.3354/ab00420

Williams-Tripp, M., d’Amico, F., Pagé, C., Bertrand, A., Némoz, M., Brown, J. (2012). Modeling rare species distribution at the edge : the case for the vulnerable endemic pyrenean desman in France. Scientific World Journal, 2012, 6 p. DOI : 10.1100/2012/612965

Piou, C., Prévost, E. (2012). A demo-genetic individual-based model for Atlantic salmon populations : model structure, parameterization and sensitivity. Ecological Modelling, 231, 37-52. DOI : 10.1016/j.ecolmodel.2012.01.025

Caill-Milly, N., Bru, N., Mahé, K., D’Amico, F. (2012). Shell shape analysis and spatial allometry patterns of Manila Clam (Ruditapes philippinarium) in a mesotidal coastal lagoon. Journal of Marine Biology, 11 p. DOI : 10.1155/2012/281206

Viscosi, V., Antonecchia, G., Lepais, O., Fortini, P., Gerber, S., Loy, A. (2012). Leaf shape and size differentiation in white oaks : assessment of allometric relationships among three sympatric species and their hybrids. International Journal of Plant Sciences, 173 (8), 875-884. DOI : 10.1086/667234

Régnier, T., Labonne, J., Gaudin, P., Bolliet, V. (2012). Influence of energetic status on ontogenetic niche shifts : emergence from the redd is linked to metabolic rate in brown trout. Oecologia, 168 (2), 371-380. DOI : 10.1007/s00442-011-2109-7

Schroder, S.L., Knudsen, C.M., Pearsons, T.N., Kassler, T.W., Beall, E., Young, S.F., Fast, D.E. (2012). Breeding success of four male life history types of spring Chinook Salmon spawning in an artificial stream. Environmental Biology of Fishes, 94 (1), 231-248. DOI : 10.1007/s10641-011-9789-z

Chat, J., Manicki, A. (2012). A SNP-based assay in a non model species : evolutionary lineage assignment of brown trout ancient DNA. Conservation Genetics Resources, 4 (1), 59-62. DOI : 10.1007/s12686-011-9474-8

Geffroy, B., Fostier, A., Guiguen, Y., Bardonnet, A. (2012). Unusual cases of adult intersexuality in the European eel Anguilla anguilla. Sexual Development, 6 (6), 316-319. DOI : 10.1159/000343781

Buoro, M., Gimenez, O., Prévost, E. (2012). Assessing adaptive phenotypic plasticity by means of conditional strategies from empirical data : the latent environmental threshold model. Evolution, 66 (4), 996-1009. DOI : 10.1111/j.1558-5646.2011.01484.x

Da Silveira Pontes, L., Magda, D. (Auteur de correspondance), Jarry, M., Gleizes, B., Agreil, C. (2012). Shrub encroachment control by browsing: Targeting the right demographic process. Acta Oecologica, 45, 25-30. DOI : 10.1016/j.actao.2012.08.006

Renou, M., Thiery, D., Pajot, E., Nielsen, B., Keller, M., Hewison, M., Labonne, J., Maurel, M.-C., Fabre-Nys, C., Blesbois, E., Beall, E., Estoup, A., Facon, B. (2012). Histoires de rencontres amoureuses. La reproduction et les comportements sexuels animaux vus par l’Inra. Presse Informations – INRA, 15 p.

Burnel, L., Angibault, J.-M., Azam, D., Bernier, F., Carrère, P., Courdier, F., Fontaine, S., Gaudin, P., Gigleux, J.-M., Marchand, F., Verger, M., Hoch, D. (2012). Bilan et perspectives des deux écoles techniques « notions et techniques en écologie » organisées par le Département EFPA. Cahier des Techniques de l’INRA, 75 (1), 11 p.

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2011 :

Vignon, M. (2011). Putting in shape – towards a unified approach for the taxonomic description of monogenean haptoral hard parts. Systematic Parasitology, 79 (3), 161-174. DOI : 10.1007/s11230-011-9303-1

Horreo, J. L., Martinez, J. L., Ayllon, F., Pola, I. G., Monteoliva, J. A., Héland, M., Garcia-Vazquez, E. (2011). Impact of habitat fragmentation on the genetics of populations in dendritic landscapes. Freshwater Biology, 56 (12), 2567-2579. DOI : 10.1111/j.1365-2427.2011.02682.x

Jaffal, A., Paris-Palacios, S., Jolly, S., Thailly, A.F., Delahaut, L., Beall, E., Roche, H., Biagianti-Risbourg, S., Betoullle, S. (2011). Cadmium and copper contents in a freshwater fish species (brook trout, Salvelinus fontinalis) from the subantarctic Kerguelen Islands. Polar Biology, 34 (3), 397-409. DOI : 10.1007/s00300-010-0895-8

Vignon, M., Dierking, J. (2011). Prey regurgitation and stomach vacuity among groupers and snappers. Environmental Biology of Fishes, 90 (4), 361-366. DOI : 10.1007/s10641-010-9746-2

Vignon, M., Pariselle, A., Vanhove, M. (2011). Modularity in attachment organs of African Cichlidogyrus (Platyhelminthes: Monogenea: Ancyrocephalidae) reflects phylogeny rather than host specificity or geographic distribution. Biological Journal of the Linnean Society, 102 (3), 694-706. DOI : 10.1111/j.1095-8312.2010.01607.x

Delcourt, J., Ylieff, M., Bolliet, V., Poncin, P., Bardonnet, A. (2011). Video tracking in the extreme : a new possibility for tracking nocturnal underwater transparent animals with fluorescent elastomer tags. Behavior Research Methods, 43 (2), 590-600. DOI : 10.3758/s13428-011-0060-5

Jaffal, A., Givaudan, N., Betoulle, S., Terreau, A., Paris-Palacios, S., Biaganti-Risbourg, S., Beall, E., Roche, H. (2011). Polychlorinated biphenyls in freshwater salmonids from the Kerguelen Islands in the Southern Ocean. Environmental Pollution, 159 (5), 1381-1389. DOI : 10.1016/j.envpol.2011.01.003

Tentelier, C., Piou, C. (2011). Obstacles to migration constrain nest distribution of Atlantic salmon. Ecology of Freshwater Fish, 20 (3), 400-408. DOI : 10.1111/j.1600-0633.2010.00452.x

Tentelier, C. (Auteur de correspondance), Larrieu, M., Aymes, J.-C., Labonne, J. (2011). Male antagonistic behaviour after spawning suggests paternal care in brown trout, Salmo trutta L. Ecology of Freshwater Fish, 20 (4), 580-287. DOI : 10.1111/j.1600-0633.2011.00507.x

Goni, N., Logan, J., Arrizabalaga, H., Jarry, M., Lutcavage, M. (2011). Variability of albacore (Thunnus alalunga) diet in the Northeast Atlantic and Mediterranean Sea. Marine Biology, 158 (5), 1057-1073. DOI : 10.1007/s00227-011-1630-x

Charmantier, A., Buoro, M., Gimenez, O., Weimerskirch, H. (2011). Heritability of short-scale natal dispersal in a large-scale foraging bird, the wandering albatross. Journal of Evolutionary Biology, 24 (7), 1487-1496. DOI : 10.1111/j.1420-9101.2011.02281.x

Bureau Du Colombier, S., Bolliet, V., Lambert, P., Bardonnet, A. (2011). Metabolic loss of mass in glass eels at different salinities according to their propensity to migrate. Estuarine Coastal and Shelf Science, 93 (1), 1-6. DOI : 10.1016/j.ecss.2011.02.021

Gaucherel, C., Salomon, L., Labonne, J. (2011). Variable self-similar sinuosity properties within simulated river networks. Earth Surface Processes and Landforms, 36 (10), 1313-1320. DOI : 10.1002/esp.2153

Vignon, M. (2011). Inference in morphological taxonomy using collinear data and small sample sizes : Monogenean sclerites (Platyhelminthes) as a case study. Zoologica Scripta, 40 (3), 306-316. DOI : 10.1111/j.1463-6409.2011.00470.x

Horreo, J.L., Ayllon, F., Perez, J., Beall, E., Garcia-Vazquez, E. (2011). Interspecific hybridization, a matter of pioneering ? Insights from Atlantic salmon and brown trout. Journal of Heredity, 102 (2), 237-242. DOI : 10.1093/jhered/esq130

Dauphin, G., Prévost, E. (2011). Viabilité de la population naturelle de saumon Atlantique de l’Allier. Paroles de Migrateurs (5), 6.

Bal, G., Rivot, E., Prévost, E., Piou, C., Baglinière, J.-L. (2011). Effect of water temperature and density of juvenile salmonids on growth of young-of-the-year Atlantic salmon Salmo salar. Journal of Fish Biology, 78 (4), 1002-1022. DOI : 10.1111/j.1095-8649.2011.02902.x

Brun, M., Abraham, C. (Auteur de correspondance), Jarry, M., Dumas, J., Lange, F., Prévost, E. (2011). Estimating an homogeneous series of a population abundance indicator despite changes in data collection procedure : a hierarchical Bayesian modelling approach. Ecological Modelling, 222 (15), 1069-1079. DOI :

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2010 :

Labonne, J., Hendry, A.P. (2010). Natural and sexual selection giveth and taketh away reproductive barriers : models of population divergence in guppies. American Naturalist, 176 (1), 26-39. DOI : 10.1086/652992

Aymes, J.-C., Larrieu, M., Tentelier, C., Labonne, J. (2010). Occurrence and variation of egg cannibalism in brown trout Salmo trutta. Naturwissenschaften, 97 (4), 435-439. DOI : 10.1007/s00114-010-0656-0

Régnier, T., Bolliet, V., Labonne, J., Gaudin, P. (2010). Assessing maternal effects on metabolic rate dynamics along early development in brown trout (Salmo trutta): an individual-based approach. Journal of Comparative Physiology B Biochemical Systemic and Environmental Physiology, 180 (1), 25-31. DOI : 10.1007/s00360-009-0385-x

Schroder, S.L., Knudsen, C.M., Pearsons, T.N., Kassler, T.W., Young, S.F., Beall, E.P., Fast, D.E. (2010). Behavior and breeding success of wild and first-generation hatchery male spring Chinook salmon spawning in an artificial stream. Transactions of the American Fisheries Society, 139 (4), 989-1003. DOI : 10.1577/T08-143.1

Dufour, F., Arrizabalaga, H., Irigoien, X., Santiago, J. (2010). Climate impacts on albacore and bluefin tunas migrations phenology and spatial distribution. Progress in Oceanography, 86 (1-2), 283-290. DOI : 10.1016/j.pocean.2010.04.007

Grimardias, D., Merchermek, N., Manicki, A., Garnier, J., Gaudin, P., Jarry, M., Beall, E. (2010). Reproductive success of Atlantic salmon (Salmo salar) mature male parr in a small river, the Nivelle : influence of shelters. Ecology of Freshwater Fish, 19 (4), 510-519. DOI : 10.1111/j.1600-0633.2010.00421.x

Dauphin, G., Prévost, E., Adams, C.E., Boylan, P. (2010). Using redd counts to estimate salmonids spawner abundances : a bayesian modelling approach. Fisheries Research, 106 (1), 32-40. DOI : 10.1016/j.fishres.2010.06.014

Valiente, A.G., Beall, E., Garcia-Vazquez, E. (2010). Population genetics of south European Atlantic salmon under global change. Global Change Biology, 16 (1), 36-47. DOI : 10.1111/j.1365-2486.2009.01922.x

Imbert, H., Labonne, J., Rigaud, C., Lambert, P. (2010). Resident and migratory tactics in freshwater European eels are size-dependent. Freshwater Biology, 55 (7), 1483-1493. DOI : 10.1111/j.1365-2427.2009.02360.x

Folcher, L., Delos, M., Jarry, M., Weissenberger, A., Eychenne, N., Regnault-Roger, C. (2010). Lower mycotoxin levels in Bt maize grain. Agronomy for Sustainable Development, 30 (4), 711-719. DOI : 10.1051/agro/2010005

Castillo, A.G.F., Beall, E., Moran, P., Martinez, J.L., Garcia-Vazquez, E. (2010). Indirect benefits for female salmon mating with brown trout. Journal of Heredity, 101 (4), 461-468. DOI : 10.1093/jhered/esq042

Vignon, M., Morat, F. (2010). Environmental and genetic determinant of otolith shape revealed by a non-indigenous tropical fish. Marine Ecology Progress Series, 411, 231-241. DOI : 10.3354/meps08651

Launey, S., Brunet, G., Guyomard, R., Davaine, P. (2010). Role of Introduction History and Landscape in the Range Expansion of Brown Trout (Salmo trutta L.) in the Kerguelen Islands. Journal of Heredity, 101 (3), 270-283. DOI : 10.1093/jhered/esp130

Buoro, M., Prévost, E., Gimenez, O. (2010). Investigating evolutionary trade-offs in wild populations of Atlantic salmon (Salmo salar) : incorporating detection probabilities and individual heterogeneity. Evolution, 64 (9), 2629-2642. DOI : 10.1111/j.1558-5646.2010.01029.x

Grimardias, D., Merchermek, N., Manicki, A., Chebaux, J., Gaudin, P., Jarry, M., Beall, E. (2010). Effects of habitat on individual reproductive success of mature male parr of Atlantic salmon Salmo salar. Journal of Fish Biology, 77 (10), 2460-2466. DOI : 10.1111/j.1095-8649.2010.02808.x