[13] Gaétan Pottier, Frédéric Marchand, Sabrina Servant, Etienne Prévost. Indice d’abondance saumon (IAS) Collection Guides et Protocoles. La pêche scientifique à l’électricité dans les milieux aquatiques continentaux, INRAE; OFB, 2022

[12] Frédéric Marchand, Agnès Starck, Frédéric Lange. Collecte d’échantillons au Centre de Ressources Biologiques Colisa. NOVAE : Innovations dans le domaine des Ressources Agronomiques pour la Recherche, 2022. ⟨hal-03749051⟩

[11] Colin Bouchard, Hilaire Drouineau, Patrick Lambert, Olivier Boutron, Delphine Nicolas. Spatio-temporal variations in glass eel recruitment at the entrance pathways of a Mediterranean delta
ICES Journal of Marine Science, Oxford University Press (OUP), 2022, 79 (6), pp.1874-1887. ⟨10.1093/icesjms/fsac122⟩

[10] Joëlle Chat, Amaïa Lamarins, Olivier Lepais. Sea trout (Salmo trutta) straying rate decreases as distance from river mouth increases. 2022. Journal of Fish Biology. 18.

[9] Jacques Labonne, Mathieu Buoro, Lucie Aulus Giacosa, Matthias Vignon, Sindre Håvarstein Eldøy, et al.. Evolutionary Ecology of Kerguelen Islands Colonization by Introduced Salmonids: SALMEVOL 1041-2 project. [Research Report] Institut national de recherche pour l’agriculture, l’alimentation et l’environnement (INRAE); Université de Pau et des Pays de l’Adour (UPPA); Institut Polaire Paul-Emile Victor. 2022. DOI : 10.17180/G70K-BN42. ⟨hal-03719420⟩

[8] Clément Lebot, Marie-Andrée Arago, Laurent Beaulaton, Gaëlle Germis, Marie Nevoux, Etienne Rivot, and Etienne Prévost, 2022. Taking full advantage of the diverse assemblage of data at hand to produce time series of abundance: a case study on Atlantic salmon populations of Brittany. Canadian Journal of Fisheries and Aquatic Sciences 79: 533–547

[7] Billy Nzau Matondo, Natacha Delrez, Agnes Bardonnet, Alain Vanderplasschen, Célia Joaquim-Justo, et al.. A complete check-up of European eel after eight years of restocking in an upland river: Trends in growth, lipid content, sex ratio and health status. Science of the Total Environment, Elsevier, 2022, 807 (3), ⟨10.1016/j.scitotenv.2021.151020⟩. ⟨hal-03470887⟩

[6] Dhamelincourt M, Rives J, Lange F, Elosegi E, Tentelier C. 2022. Habitat choice versus habitat transformation in a nest-building fish: which matters most?, Behavioral Ecology, arac029,

[5] Vallecillo D, Guillemain M, Authier M, Bouchard C, Cohez D, et al. (2022) Accounting for detection probability with overestimation by integrating double monitoring programs over 40 years. PLOS ONE 17(3): e0265730. DOI: 10.1371/journal.pone.0265730

[4] Cubry, P.; Oddou-Muratorio, S.; Scotti, I.; Lefèvre, F. 2022. Interactions between microenvironment, selection and genetic architecture drive multiscale daptation in a simulation experiment. Journal of Evolutionary Biology, 00, 116. DOI:10.1111/jeb.13988

[3] Bouchard, C; Buoro, M; Lebot, C; Carlson, S.M. 2022. Synchrony in population dynamics of juvenile Atlantic salmon: analyzing spatiotemporal variation and the influence of river flow and demography. Canadian Journal of Fisheries and Aquatic Sciences, e-first. DOI:10.1139/cjfas-2021-0017

[2] Crowley, Philip H.; Tentelier, Cédric. 2022. Resolving conflict over within-pair mating rate in external fertilizers. Journal of Theoretical Biology, 532(110926). DOI:10.1016/j.jtbi.2021.110926

[1] Crowley, Philip H.; Tentelier, Cédric. 2022. Polyandry as a male strategy ? A game between aggressive and tolerant males, arbitrated by females. The American Naturalist, 199(3):345-361. DOI:10.1086/718028.


[16] Elorri Arevalo, Anthony Maire, Stéphane Tétard, Etienne Prévost, Frédéric Lange, et al.. Does global change increase the risk of maladaptation of Atlantic salmon migration through joint modifications of river temperature and discharge?. Proceedings of the Royal Society B: Biological Sciences, Royal Society, The, 2021, 288 (1964), ⟨10.1098/rspb.2021.1882⟩. ⟨hal-03471893⟩

[15] Chevalier, Louise; De Coligny, François; Labonne, Jacques. A demogenetic individual based model for the evolution of traits and genome architecture under sexual selection. Peer Community Journal, Volume 2 (2022), article no. e8. doi : 10.24072/pcjournal.83.

[14] Tentelier, Cédric; Bouchard, Colin; Bernardin, Anaïs; Tauzin, Amandine; Aymes, Jean-Christophe; Lange, Frédéric; Recapet, Charlotte; Rives, Jacques. The dynamics of spawning acts by a semelparous fish and its associated energetic costs. Peer Community Journal, Volume 1 (2021), article no. e49. doi : 10.24072/pcjournal.56.

[13] Karin E Limburg and Fran ̧coise Daverat. COVID, Climate Change, and Professional Travel: Reflec- tions by Fisheries Scientists During the Pandemic. Fisheries, 46(9):442–444, September 2021. doi: 10.1002/fsh.10607. URL

[12] Thérèse Callet, Hongyan Li, Pascale Coste, Stéphane Glise, Cécile Heraud, Patrick Maunas, Yvan Mercier, Nicolas Turonnet, Chloé Zunzunegui, St ́ephane Panserat, Valérie Bolliet, and Lucie Marandel. Modulation of Energy Metabolism and Epigenetic Landscape in Rainbow Trout Fry by a Parental Low Protein/High Carbohydrate Diet. Biology, 10(7), 2021. doi: 10.3390/biology10070585. URL

[11] Dragos Postolache, Sylvie Oddou-Muratorio, Elia Vajana, Francesca Bagnoli, Erwan Guichoux, Arndt Hampe, Gregoire Le Provost, Isabelle Lesur, Flaviu Popescu, Ivan Scotti, Andrea Piotti, and Giovanni Vendramin. Genetic signatures of divergent selection in European beech ( Fagus sylvatica L.) are associated with the variation in temperature and precipitation across its distribution range. Molecular Ecology, 2021. doi: 10.1111/mec.16115. URL

[10] Nils Teichert, Raphael Lagarde, Nicolas Occelli, Dominique Ponton, and Philippe Gaudin. Water temperature influences larval survival of the amphidromous goby Sicyopterus lagocephalus. Ecology of Freshwater Fish, 2021. doi: 10.1111/eff.12602. URL

[9] Clément Lebot, Marie-Andrée Arago, Laurent Beaulaton, Gaëlle Germis, Marie Nevoux, Etienne Rivot, and Etienne Prévost. Taking full advantage of the diverse assemblage of data at hand to produce time series of abundance. A case study on Atlantic salmon populations of Brittany. Canadian Journal of Fisheries and Aquatic Sciences, 2021. doi: 10.1139/cjfas-2020-0368. URL https://

[8] Folio, D., M., Gil, J., Caudron, A., & Labonne J. (2021). Genotype-by-environment interactions drive the maintenance of genetic variation in a Salmo trutta L. hybrid zone. Evolutionary Applications.

[7] Aulus-Giacosa, L., Guéraud, F., Gaudin, P., Buoro, M., Aymes, J. C., Labonne, J., & Vignon, M. (2021). Human influence on brown trout juvenile body size during metapopulation expansion. Biology letters, 17(10), 20210366.

[6] Cucherousset, J., Sundt‐Hansen, L. E., Buoro, M., Závorka, L., Lassus, R., Bækkelie, K. A., … & Hindar, K. (2021). Growth‐enhanced salmon modify stream ecosystem functioning. Journal of Fish Biology.

[5] Jousseaume, T., Roussel, JM., Beaulaton, L. et al. Molecular detection of the swim bladder parasite Anguillicola crassus (Nematoda) in fecal samples of the endangered European eel Anguilla anguilla. Parasitol Res (2021).

[4] Philip H. Crowley, and Jacques Labonne. Theory of environmental sex determination: Trending populations in stressful environments. Evolution.

[3] Julien Cucherousset, Rémy Lassus, Carsten Riepe, Paul Millet, Frédéric Santoul, Robert Arlinghaus, and Mathieu Buoro. Quantitative estimates of freshwater fish stocking practices by recreational an- gling clubs in France. Fisheries Management and Ecology, page 10 p., 2021. doi: 10.1111/fme.12471. URL

[2] Jacques Labonne, Aurélie Manicki, Louise Chevalier, Marin Tétillon, François Guéraud, and Andrew P Hendry. Using Reciprocal Transplants to Assess Local Adaptation, Genetic Rescue, and Sexual Selection in Newly Established Populations. Genes, 12(1):20 p., 2021. doi: 10.3390/genes12010005. URL

[1] Davidsen, J.G., Bordeleau, X., Eldøy, S.H. et al. Marine habitat use and feeding ecology of introduced anadromous brown trout at the colonization front of the sub-Antarctic Kerguelen archipelago. Sci Rep 11, 11917 (2021).


[15] Colin Bouchard, Frédéric Lange, François Gueraud, Jacques Rives, and Cédric Tentelier. Sexual maturity increases mobility and heterogeneity in individual space use in Atlantic salmon ( Salmo salar ) parr. Journal of Fish Biology, 96(4):925–938, April 2020. doi: 10.1111/jfb.14282. URL

[14] Mathilde Monperrus, Christophe Pécheyran, and Valérie Bolliet. Imaging Differential Mercury Species Bioaccumulation in Glass Eels Using Isotopic Tracers and Laser Ablation Inductively Coupled Plasma Mass Spectrometry. Applied Sciences, 10(7):2463, April 2020. doi: 10.3390/app10072463. URL

[13] Gaëtan Pottier, William R. Beaumont, Frédéric Marchand, Pierre-Yves Le Bail, Didier Azam, Jacques Rives, Régis Vigouroux, and Jean-Marc Roussel. Electrofishing in streams of low water conductivity but high biodiversity value: Challenges, limits and perspectives. Fisheries Management and Ecology, 27(1):52–63, February 2020. doi: 10.1111/fme.12384. URL hal-02299640.

[12] Raphaël Lagarde, Nils Teichert, Henri Grondin, Thomas Hue, Philippe Gaudin, and Dominique Pon- ton. Influence of larval and juvenile life history on age at first maturity in two tropical amphidro- mous fish species. Ecology of Freshwater Fish, 29(1):63–73, 2020. doi: 10.1111/eff.12488. URL

[11] Matthias Vignon and Jean-Christophe Aymes. Functional effect of vaterite – the presence of an alternative crystalline structure in otoliths alters escape kinematics of the brown trout. Journal of Experimental Biology, 223(12), 2020. doi: 10.1242/jeb.222034. URL hal-02912282.

[10] Loic Baumann, Joanna Vega, Joris Philip, Fabien Polese, Fabrice Vétillard, Maud Pierre, Romaric Le Barh, Philippe Jatteau, Agnes Bardonnet, and Marie-Laure Acolas. Tolerance of young allis shad Alosa alosa (Clupeidae) to oxy-thermic stress. Journal of Fish Biology, 2020. doi: 10.1111/jfb.14562. URL

[9] Hengtong Liu, Amaia Lamarins, Jacques Labonne, Mathilde Monperrus, Pascale Coste, Emmanuel Huchet, Jacques Rives, Iban Seiliez, and Valérie Bolliet. New insights into methylmercury in- duced behavioral and energy-related gene transcriptional responses in European glass eel (Anguilla anguilla). Chemosphere, 255, 2020. doi: 10.1016/j.chemosphere.2020.127020. URL https: //

[8] Louise Chevalier, Jacques Labonne, Matthias Galipaud, and Francois-Xavier Dechaume- Moncharmont. Fluctuating Dynamics of Mate Availability Promote the Evolution of Flexible Choosiness in Both Sexes. American Naturalist, 196(6):730–742, 2020. doi: 10.1086/711417. URL

[7] Marius Dhamelincourt, Mathieu Buoro, Jacques Rives, Stellia Sebihi, and Cédric Tentelier. Individual and group characteristics affecting nest building in sea lamprey ( Petromyzon marinus L. 1758 ). Journal of Fish Biology, pages 1–9, 2020. doi: 10.1111/jfb.14601. URL hal-03036001.

[6] Elorri Arevalo, Aitor Larran ̃aga, and Agnes Bardonnet. Comparison of food availability and perfor- mances of first-feeding alevins through spring with the occurrence of a flood. Ecology of Freshwater Fish, 2020. doi: 10.1111/eff.12546. URL

[5] Maxime Olmos, Mark R Payne, Marie Nevoux, Etienne Prévost, Gerald Chaput, Hubert Du Pontavice, Jérˆome Guitton, Timothy Sheehan, Katherine Mills, and Etienne Rivot. Spatial synchrony in the response of a long range migratory species ( Salmo salar ) to climate change in the North Atlantic Ocean. Global Change Biology, 26(3):1319–1337, 2020. doi: 10.1111/gcb.14913. URL

[4] Matthias Vignon. When the presence of a vateritic otolith has morphological effect on its aragonitic partner: trans-lateral compensation induces bias in microecological patterns in one-side-only vateritic otolith. Canadian Journal of Fisheries and Aquatic Sciences, 77(2):285–294, 2020. doi: 10.1139/cjfas- 2019-0066. URL

[3] Olivier Lepais, Emilie Chancerel, Christophe Boury, Franck SALIN, Aurélie Manicki, Laura Taillebois, Cyril Dutech, Abdeldjalil Aissi, Cecile F. E. Bacles, Franc ̧oise Daverat, Sophie Launey, and Erwan Guichoux. Fast sequence-based microsatellite genotyping development workflow. PeerJ, 8:1–28, 2020. doi: 10.7717/peerj.9085. URL

[2] Sindre Eldøy, Jan Davidsen, Matthias Vignon, and Michael Power. The biology and feeding ecol- ogy of Arctic charr in the Kerguelen Islands. Journal of Fish Biology, page 12 p., 2020. doi: 10.1111/jfb.14596. URL

[1] Marie L. Fujitani, Carsten Riepe, Thilo Pagel, Mathieu Buoro, Frédéric Santoul, Rémy Lassus, Julien Cucherousset, and Robert Arlinghaus. Ecological and social constraints are key for volun- tary investments into renewable natural resources. Global Environmental Change, 63, 2020. doi: 10.1016/j.gloenvcha.2020.102125. URL

2019 :

Matthias Vignon. When the presence of a vateritic otolith has morphological effect on its aragonitic partner: translateral compensation induces bias in microecological patterns in one-side-only vateritic otolith. Can. J. Fish. Aquat. Sci., 2019 00: 1–10 (0000)

Maxime Olmos, Mark R Payne, Marie Nevoux, Etienne Prévost, Gerald Chaput, Hubert Du Pontavice, Jérôme Guitton, Timothy Sheehan, Katherine Mills, and Etienne Rivot. Spatial synchrony in the response of a long range migratory species ( Salmo salar ) to climate change in the North Atlantic Ocean. Global Change Biology, 2019. doi: 10.1111/gcb.14913. URL

Vanessa Rouaud, Nicolas Susperregui, Anne Fahy, Rémy Guyoneaud, Sabrina Bichon, Camilla Liénart, Yolanda Del Amo, Nicolas Savoye, Philippe Gaudin, Robert Duran, and B ́eatrice Lauga. Dynamics of microbial communities across the three domains of life over an annual cycle with emphasis on marine mucilage in the Southern Bay of Biscay resolved by microbial fingerprinting. Continental Shelf Research, 186:127–137, June 2019. doi: 10.1016/j.csr.2019.06.003. URL

Raphael Lagarde, Nils Teichert, Henri Grondin, Thomas Hue, Philippe Gaudin, and Dominique Ponton. Influence of larval and juvenile life history on age at first maturity in two tropical amphidromous fish species. Ecology of Freshwater Fish, page 11 p., 2019. doi: 10.1111/eff.12488. URL online first.

Lucie Aulus Giacosa, Jean-Christophe Aymes, Philippe Gaudin, Matthias Vignon. Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales. Marine and Freshwater Research, CSIRO Publishing, 2019, 70 (12), pp.1828-1837. ⟨10.1071/MF19059⟩. ⟨hal-02414999⟩

Hengtong Liu, Jacques Labonne, Pascale Coste, Emmanuel Huchet, Elisabeth Plagnes-Juan, Jacques Rives, Vincent Veron, Iban Seiliez, and Valérie Bolliet. Looking at the complex relationships between migration behavior and conditional strategy based on energy metabolism in the European glass eel (Anguilla anguilla). Science of The Total Environment, 696:np, 2019. doi: 10.1016/j.scitotenv.2019.134039. URL

Gaëtan Pottier, William R. Beaumont, Frédéric Marchand, Pierre-Yves Le Bail, Didier Azam, Jacques Rives, Régis Vigouroux, and Jean-Marc Roussel. Electrofishing in streams of low water conductivity but high biodiversity value: Challenges, limits and perspectives. Fisheries Management and Ecology, page online first, 2019. doi: 10.1111/fme.12384. URL hal-02299640.

Maxime Olmos, Felix Massiot-Granier, Etienne Prévost, Gerald Chaput, Ian R Bradbury, Marie Nevoux, and Etienne Rivot. Evidence for spatial coherence in time trends of marine life history traits of Atlantic salmon in the North Atlantic. Fish and Fisheries, 20(2):322–342, 2019. doi: 10.1111/faf.12345. URL

Charlotte Récapet, Mathilde Arrivé, Blandine Doligez, and Pierre Bize. Antioxidant capacity is repeatable across years but does not consistently correlate with a marker of peroxidation in a free-living passerine bird. Journal of Comparative Physiology B, 189(2):283–298, 2019. doi: 10.1007/s00360-019-01211-1. URL

Elorri Arevalo, Aitor Larrañaga, Margaret Lang, Etienne Prévost, and Agnes Bardonnet. Comparison of the propensity to drift for three invertebrate taxa: a laboratory study. Hydrobiologia, 830 (1):243–254, 2019. doi: 10.1007/s10750-018-3870-y. URL hal-02019966.

Colin Bouchard, Cameron Bracken, Willy Dabin, Olivier Van Canneyt, Vincent Ridoux, Jérôme Spitz, and Matthieu Authier. A risk-based forecast of extreme mortality events in small cetaceans: Using stranding data to inform conservation practice. Conservation Letters, page 10 p., 2019. doi: 10.1111/conl.12639. URL

2018 :

Nawal Eldrogi, Franck Luthon, Benoit Larroque, Sultan Alqaddafi, and Valérie Bolliet. Motion estimation of glass eels by differential methods. International Science and Technology Journal, pages 299 – 315, July 2018. URL

Maite Arroita, Lorea flores, Aitor Larrañaga, Eric Chauvet, and Arturo Elosegi. Hydrological contingency: drying history affects aquatic microbial decomposition. Aquatic Sciences – Re- search Across Boundaries, 80(3):np, 2018. doi: 10.1007/s00027-018-0582-3. URL https://hal.

Christian Mougin, Emmanuelle Artige, Frédéric Marchand, Samuel Mondy, Céline Ratie, Nadine Sellier, Philippe Castagnone, Armelle Coeur D’Acier, Daniel Esmenjaud, Céline Faivre-Primot, Laurent Granjon, Valérie Hamelet, Frédéric Lange, Sylvie Pages, Frédéric Rimet, Nicolas Ris, and Guillaume Salle. BRC4Env, a network of Biological Resource Centres for research in environmental and agricultural sciences. Environmental Science and Pollution Research, page np, 2018. doi: 10.1007/s11356-018-1973-7. URL

Veron V., Marandel L.L., Liu J., Velez E.J., Lepais O., Panserat S., Skiba S., and Seiliez I.. DNA methylation of the promoter region of bnip3 and bnip3l genes induced by metabolic programming. BMC Genomics, 19(1):np, 2018. doi: ⟨10.1186/s12864-018-5048-4⟩ Vincent Veron and Lucie Marandel contributed equally to this work.

Libor Zavorka, Mathieu Buoro, and Julien Cucherousset. The negative ecological impacts of a globally introduced species decrease with time since introduction. Global Change Biology, page 10 p., 2018. doi: 10.1111/gcb.14323. URL

Matthias VIGNON. Short-term stress for long-lasting otolith morphology – brief embryological stress disturbance can reorient otolith ontogenetic trajectory. Canadian Journal of Fisheries and Aquatic Sciences, pages 1–10, 2018. doi: 10.1139/cjfas-2017-0110. URL https://hal.archives-ouvertes. fr/hal-01855436.

Bouchard C., Bardonnet, A, Buoro, M, & C. Tentelier. Effects of spatial aggregation of nests on population recruitment: the case of a small population of Atlantic salmon. Ecosphere, 2018, 9(4):e02178. DOI: 10.1002/ecs2.2178

T. A. C. Gordon, H. R. Harding, F. K. Clever, I. K. Davidson, W. Davison, et al.. Fishes in a changing world: learning from the past to promote sustainability of fish populations. Journal of Fish Biology, Wiley, 2018, 92 (3), pp.804-827. 〈10.1111/jfb.13546〉. 〈hal-01753931〉

Cécile F.E. Bacles, Colin Bouchard, Frédéric Lange, Aurélie Manicki, Cédric Tentelier, et al.. Estimating the effective number of breeders from single parr samples for conservation monitoring of wild populations of Atlantic salmon Salmo salar. Journal of Fish Biology, Wiley, 2018, pp. online first. 〈10.1111/jfb.13537〉. 〈hal-01716615〉

Elorri Arevalo, Stephane Panserat, Iban Seiliez, A. Larrañaga, Agnes Bardonnet. Effect of food shortage and temperature on age 0+ salmonids: A contribution to predict the effects of climate change. Journal of Fish Biology, Wiley, 2018, 11 p. 〈10.1111/jfb.13533〉. 〈hal-01705840〉

Marc Jarry, Edward Beall, Patrick Davaine, Francois Gueraud, Philippe Gaudin, et al.. Sea trout (Salmo trutta) growth patterns during early steps of invasion in the Kerguelen Islands. Polar Biology, Springer Verlag, 2018, pp. online first. 〈10.1007/s00300-018-2253-1〉. 〈hal-01705841〉

Adam M. Siepielski, Michael B. Morrissey, Mathieu Buoro, Stephanie M. Carlson, Christina M. Caruso, et al.. Response to comment on « Precipitation drives global variation in natural selection ». Science, American Association for the Advancement of Science, 2018, 359 (6374), 2 p. 〈10.1126/science.aan5760〉. 〈hal-01705843〉

Lucie Marandel, Philippe Gaudin, Francois Gueraud, Stéphane Glise, Alexandre Herman, et al.. A reassessment of the carnivorous status of salmonids : hepatic glucokinase is expressed in wild fish in Kerguelen Islands. Science of the Total Environment, Elsevier, 2018, 612, pp.276-285. 〈10.1016/j.scitotenv.2017.08.247〉. 〈hal-01607554〉

Masson, S., Lepais, O., Manicki, A., Prévost, E., Chat, J. (2018). Disentangling individual movement between populations from effective dispersal in the facultative anadromous Salmo trutta L. Ecology of Freshwater Fish, 27 (1), 323-338. DOI : 10.1111/eff.12349

2017 :

Marchand, F., Beaulaton, L., Prévost, E., Delanoë, R., Destouches, J. P., Gueraud, F., … & Rives, J. (2017). Abundance indices and biological traits of juvenile salmon (Salmo salar) sampled in three rivers on the Atlantic and Channel coasts (France). Biodiversity data journal, (5).

Bolliet, V., Labonne J., Olazcuaga, L., Panserat, S., Seiliez, I. (2017). Modeling of autophagy-related gene expression dynamics during long term fasting in European eel (Anguilla anguilla). Scientific Reports 7: 17896. DOI:10.1038/s41598-017-18164-6

Raffard, A., Lecerf, A., Cote, J., Buoro, M., Lassus, R., & Cucherousset, J. (2017). The functional syndrome: linking individual trait variability to ecosystem functioning. Proc. R. Soc. B, 284:1868. DOI: 10.1098/rspb.2017.1893

Ripple, W. J., Wolf, C., Newsome, T. M., Galetti, M., Alamgir, M., Crist, E., … & 15,364 scientist signatories from 184 countries. (2017). World Scientists’ Warning to Humanity: A Second Notice. BioScience, 67(12), 1026-1028.

Jatteau, P., Drouineau, Charles, Carry, L., Lange, F., Lambert (2017). Thermal tolerance of allis shad (Alosa alosa) embryos and larvae: Modeling and potential applications. Aquatic Living Resources, 30 (2), 8 p. DOI : 10.1051/alr/2016033

Hwan, J. L., Fernández-Chacón, A., Buoro, M., Carlson, S. M. (2017). Dry season survival of juvenile salmonids in an intermittent coastal stream. Canadian Journal of Fisheries and Aquatic Sciences, online first. DOI : 10.1139/cjfas-2017-0026

Vivancos, A., Closs, G., Tentelier, C. (2017). Are 2D space-use analyses adapted to animals living in 3D environments? A case study on a fish shoal. Behavioral Ecology, 28 (2), 485-493. DOI : 10.1093/beheco/arw175

Vignon, M. (2017). Investigating morphospace occupation in multi-scale ecological and evolutionary data using regression tree: case studies and perspectives. Evolutionary Biology, 44 (1), 120-134. DOI : 10.1007/s11692-016-9386-3

Gauthey, Z., Tentelier, C., Lepais, O., Elosegi, A., Royer, L., Glise, S., Labonne, J. (2017). With our powers combined: integrating behavioral and genetic data to estimate mating success and sexual selection. Rethinking Ecology, 2, 1-26. DOI : 10.3897/rethinkingecology.2.14956

Siepielski, A. M., Morrissey, M. B., Buoro, M., Carlson, Caruso, C. M., Clegg, S. M., Coulson, T., DiBattista, J., Gotanda, K. M., Francis, C. D., Hereford, J., Kingsolver, J. G., Augustine, Kruuk, L. E. B., Martin, R. A., Sheldon, B. C., Sletvold, N., Svensson, E. I., Wade, M. J., MacColl, A. D. C. (2017). Precipitation drives global variation in natural selection. Science, 355 (6328), 959-962. DOI : 10.1126/science.aag2773

Jacquin, L., Dybwad, C., Rolshausen, Hendry, A. P., Reader, S. M. (2017). Evolutionary and immediate effects of crude-oil pollution: depression of exploratory behaviour across populations of Trinidadian guppies. Animal Cognition, 20 (1), 97-108. DOI : 10.1007/s10071-016-1027-9

Gauthey, Z., Lang, M., Elosegi, A., Tentelier, C., Rives, J., Labonne, J. (2017). Brown trout spawning habitat selection and its effects on egg survival. Ecology of Freshwater Fish, 26 (1), 133-140. DOI : 10.1111/eff.12262

Lepais, O., Manicki, A., Glise, S., Buoro, M., Bardonnet, A. (2017). Genetic architecture of threshold reaction norms for male alternative reproductive tactics in Atlantic salmon (Salmo salar L.). Scientific Reports, 7 (43552). DOI : 10.1038/srep43552

Jacquin, L., Gauthey, Z., Roussille, V., Le Hénaff, M., Tentelier, C., Labonne, J. (2017). Melanin in a changing world: brown trout coloration reflects alternative reproductive strategies in variable environments. Behavioral Ecology, 28 (6), 1423-1434. DOI : 10.1093/beheco/arx102

Tentelier, C., Barroso-Gomila, O., Lepais, O., Manicki, A., Romero Garmendia, I., Jugo, B. (2017). Testing mate choice and overdominance at MH in natural families of Atlantic salmon Salmo salar. Journal of Fish Biology, 90 (4), 1644-1659. DOI : 10.1111/jfb.13260

Elosegi, A., Díez, J. R., Flores, L., Molinero, J. (2017). Pools, channel form, and sediment storage in wood-restored streams: potential effects on downstream reservoirs. Geomorphology, 279, 165-175. DOI : 10.1016/j.geomorph.2016.01.007

Pastor, A., Lupon, A., Gomez-Gener, L., Rodriguez-Castillo, T., Abril, M., Arce, M. I., Aristi, I., Arroita, M., Bravo, A., De Castro-Catala, N., Del Campo, R., Casa-Ruiz, J. P., Estevez, E., Fernandez, D., Fillol, M., Flores, L., Freixa, A., Gimenez-Grau, P., Gonzalez-Ferreras, A., Hernandez-del Amo, E., Martin, E., Martinez, A., Monroy, S., Mora-Gomez, J., Palacin-Lizarbe, C., Pereda, O., Poblador, S., Rasines-Ladero, R., Reyes, M., Rodriguez-Lozano, P., Ruiz, C., Sanpera-Calbet, I., Solagaistua, L., Tornero, I., Catalan, N. (2017). Local and regional drivers of headwater streams metabolism : insights from the first AIL collaborative project. Limnetica, 36 (1), 67-85. DOI : 10.2381/limn.36.06

Bolliet, V., Claveau, J., Jarry, M., Gonzalez, P., Baudrimont, Monperrus, M. (2017). Migratory behavior, metabolism, oxidative stress and mercury concentrations in marine and estuarine European glass eels (Anguilla anguilla). Physiology and Behavior, 169, 33-40. DOI : 10.1016/j.physbeh.2016.11.008

Arroita, M., Flores, L., Larrañaga, Martínez, Martínez-Santos, M., Pereda, Ruiz-Romera, Solagaistua, Elosegi (2017). Water abstraction impacts stream ecosystem functioning via wetted-channel contraction. Freshwater Biology, 62 (2), 243-257. DOI : 10.1111/fwb.12864

Marengo, M., Baudouin, M., Viret, A., Laporte, M., Berrebi, Vignon, M., Marchand, B., Durieux, E. (2017). Combining microsatellite, otolith shape and parasites community analyses as a holistic approach to assess population structure of Dentex dentex. Journal of Sea Research, 128, 1-14. DOI : 10.1016/j.seares.2017.07.003

Dauphin, G., Brugel, C., Legrand, M., Prévost, E. (2017). Separating wild versus stocking components in fish recruitment without identification data: a hierarchical modelling approach. Canadian Journal of Fisheries and Aquatic Sciences, 74 (7), 1111-1124. DOI : 10.1139/cjfas-2015-0443

Bal, G., Montorio, L., Rivot, E., Prévost, E., Baglinière, J.-L., Nevoux, M. (2017). Evidence for long-term change in length, mass and migration phenology of anadromous spawners in French Atlantic salmon Salmo salar . Journal of Fish Biology, 90 (6), 2375-2393. DOI : 10.1111/jfb.13314

2016 :

Tentelier, C., Larranaga, N., Lepais, O., Manicki, A., Rives, J., Lange, F. (2016). Space use and its effects on reproductive success of anadromous Atlantic salmon. Canadian Journal of Fisheries and Aquatic Sciences, 73 (10), 1461-1471. DOI : 10.1139/cjfas-2015-0518

Gauthey, Z., Hendry, A. P., Elosegi, A., Tentelier, C., Labonne, J. (2016). The context dependence of assortative mating: a demonstration with conspecific salmonid populations. Journal of Evolutionary Biology, 29 (9), 1827-1835. DOI : 10.1111/jeb.12914

Geffroy, B., Guilbaud, F., Amilhat, E., Beaulaton, L., Vignon, M., Huchet, E., Rives, J., Bobe, J., Fostier, A., Guiguen, Y., Bardonnet, A. (2016). Sexually dimorphic gene expressions in eels: useful markers for early sex assessment in a conservation context. Scientific Reports, 6, 1-11. DOI : 10.1038/srep34041

Geffroy, B., Bolliet, V., Bardonnet, A. (2016). Kleptoparasitism and aggressiveness are influenced by standard metabolic rate in eels. Physiology and Behavior, 157, 165-169. DOI : 10.1016/j.physbeh.2016.01.046

Aymes, J.-C., Vignon, M., Beall, E., Gueraud, F., Gaudin, P. (2016). Age validation of the Kerguelen Islands brown trout, Salmo trutta L., and selection of the otolith optimal zone for investigating chronological data series. Fisheries Research, 176, 22-29. DOI : 10.1016/j.fishres.2015.11.025

Teichert, N., Valade, P., Fostier, A., Grondin, H., Gaudin, P. (2016). Reproductive biology of an endemic amphidromous goby, Cotylopus acutipinnis, from La Réunion Island. Marine and Freshwater Research, 67 (4), 526-536. DOI : 10.1071/MF14264

Teichert, N., Valade, P., Grondin, H., Trichet, E., Sardenne, F., Gaudin, P. (2016). Pelagic larval traits of the amphidromous goby Sicyopterus lagocephalus display seasonal variations related to temperature in La Reunion Island. Ecology of Freshwater Fish, 25 (2), 234-247. DOI : 10.1111/eff.12205

Geffroy, B., Bardonnet, A. (2016). Sex differentiation and sex determination in eels : consequences for management. Fish and Fisheries, 17 (2), 375-398. DOI : 10.1111/faf.12113

Labonne, J., Kaeuffer, R., Gueraud, F., Zhou, M., Manicki, A., Hendry, A. P. (2016). From the bare minimum : genetics and selection in populations founded by only a few parents. Evolutionary Ecology Research, 17 (1), 21-34.

Gil, J., Caudron, A., Labonne, J. (2016). Can female preference drive intraspecific diversity dynamics in brown trout (Salmo trutta, L.)?. Ecology of Freshwater Fish, 25 (3), 352-359. DOI : 10.1111/eff.12215

Marandel, L., Lepais, O., Arbenoits, E., Veron, V., Dias, K., Zion, M., Panserat, S. (2016). Remodelling of the hepatic epigenetic landscape of glucose-intolerant rainbow trout (Oncorhynchus mykiss) by nutritional status and dietary carbohydrates. Scientific Reports, 6, 12 p. DOI : 10.1038/srep32187

Tentelier, C., Aymes, J.-C., Spitz, B., Rives, J. (2016). Using proximity loggers to describe the sexual network of a freshwater fish. Environmental Biology of Fishes, 99 (8-9), 621-631. DOI : 10.1007/s10641-016-0504-y

Flores, L., Bailey, R. A., Elosegi, A., Larrañaga, Reiss, J. (2016). Habitat Complexity in Aquatic Microcosms Affects Processes Driven by Detritivores. Plos One, 11 (11), e0165065. DOI : 10.1371/journal.pone.0165065

Tentelier, C., Lepais, O., Larranaga, N., Manicki, A., Lange, F., Rives, J. (2016). Sexual selection leads to a tenfold difference in reproductive success of alternative reproductive tactics in male Atlantic salmon. Naturwissenschaften, 103 (5-6), 13 p. DOI : 10.1007/s00114-016-1372-1

Jacquin, L., Reader, S. M., Boniface, A., Mateluna, Patalas, Pérez-Jvostov, F., Hendry, A. P. (2016). Parallel and nonparallel behavioural evolution in response to parasitism and predation in Trinidadian guppies. Journal of Evolutionary Biology, 29 (7), 1406-1422. DOI : 10.1111/jeb.12880

Gauthey, Z., Panserat, S., Elosegi, A., Herman, A., Tentelier, C., Labonne, J. (2016). Experimental evidence of population differences in reproductive investment conditional on environmental stochasticity. Science of the Total Environment, 541, 143-148. DOI : 10.1016/j.scitotenv.2015.09.69

Gil, J., Labonne, J., Caudron, A. (2016). Evaluation of strategies to conserve and restore intraspecific biodiversity of brown trout: outcomes from genetic monitoring in the French Alps. Reviews in Fish Biology and Fisheries, 26 (1), 1-11. DOI : 10.1007/s11160-015-9405-y

2015 :

Legrand, M., Prévost, E. (2015). Amélioration des conditions de franchissement à Poutès. Paroles de Migrateurs (11), 3-4.

Vuillaume, B., Valette, V., Lepais, O., Grandjean, F., Breuil, M. (2015). Genetic evidence of hybridization between the endangered native species Iguana delicatissima and the invasive Iguana iguana (Reptilia, Iguanidae) in the Lesser Antilles: management Implications. Plos One, 10 (6). DOI : 10.1371/journal.pone.0127575

Claveau, J., Monperrus, M., Jarry, M., Pinaly, H., Baudrimont, M., Gonzalez , P., Amouroux, D., Bardonnet, A., Bolliet, V. (2015). Spatial and seasonal variations of methylmercury in European glass eels (Anguilla anguilla) in the Adour estuary (France) and relation to their migratory behaviour. Environmental Science and Pollution Research, 22 (14), 10721-10732. DOI : 10.1007/s11356-015-4303-3

Vignon, M. (2015). Extracting environmental histories from sclerochronological structures — Recursive partitioning as a mean to explore multi-elemental composition of fish otolith. Ecological Informatics, 30, 159-169. DOI : 10.1016/j.ecoinf.2015.10.002

Buzatto, B. A., Buoro, M., Hazel, W. N., Tomkins, J. L. (2015). Investigating the genetic architecture of conditional strategies using the environmental threshold model. Proceedings of the Royal Society. B, Biological Sciences, 282 (1821), 10 p. DOI : 10.1098/rspb.2015.2075

Gauthey, Z., Freychet, M., Manicki, A., Herman, A., Lepais, O., Panserat, S., Elosegi, A., Tentelier, C., Labonne, J. (2015). The concentration of plasma metabolites varies throughout reproduction and affects offspring number in wild brown trout (Salmo trutta). Comparative Biochemistry and Physiology. Part A, Molecular and Integrative Physiology, 184, 90-96. DOI : 10.1016/j.cbpa.2015.01.025

Geffroy, B., Sadoul, B., Bardonnet, A. (2015). Behavioural syndrome in juvenile eels and its ecological implications. Behaviour, 152 (2), 147-166. DOI : 10.1163/1568539X-00003236

Galipaud, M. (Auteur de correspondance), Gauthey, Z., Turlin, J., Bollache, L., Lagrue, C. (2015). Mate choice and male-male competition among morphologically cryptic but genetically divergent amphipod lineages. Behavioral Ecology and Sociobiology, 69 (12), 1907-1916. DOI : 10.1007/s00265-015-2003-0

Antonecchia, G., Fortini, P., Lepais, O., Gerber, S., Léger, P., Scippa, G. S., Viscosi, V. (2015). Genetic structure of a natural oak community in central Italy: Evidence of gene flow between three sympatric white oak species (Quercus, Fagaceae). Annals of Forest Research, 58 (2), 205-216. DOI : 10.15287/afr.2015.415

Vignon, M. (2015). Disentangling and quantifying sources of otolith shape variation across multiple scales using a new hierarchical partitioning approach. Marine Ecology Progress Series, 534, 163-177. DOI : 10.3354/meps11376

Régnier, T., Labonne, J., Chat, J., Yano, A., Guiguen, Y., Bolliet, V. (2015). No early gender effects on energetic status and life history in a salmonid. Royal Society Open Science, 2 (12), 1-8. DOI : 10.1098/rsos.150441

Perga, M.-E., Prévost, E., Baglinière, J.-L. (2015). Préserver la richesse des milieux aquatiques. Pour la Science, 22-25.

Claveau, J., Monperrus, M., Jarry, M., Baudrimont, M., Gonzalez, P., Cavalheiro, J., Mesmer-Dudons, N., Bolliet, V. (2015). Methylmercury effects on migratory behaviour in glass eels (Anguilla anguilla) : an experimental study using isotopic tracers. Comparative Biochemistry and Physiology. Toxicology and Pharmacology, 171, 15-27. DOI : 10.1016/j.cbpc.2015.03.003

Piou, C., Taylor, M. H., Papaix, J., Prévost, E. (2015). Modelling the interactive effects of selective fishing and environmental change on Atlantic salmon demogenetics. Journal of Applied Ecology, 52 (6), 1629-1637. DOI : 10.1111/1365-2664.12512

2014 :

Chatelain, M., Gasparini, J., Jacquin, L., Frantz, A. (2014). The adaptive function of melanin-based plumage coloration to trace metals. Biology Letters, 10 (3). DOI : 10.1098/rsbl.2014.0164

D’Elbée, J., Lalanne, Y., Castege, I., Bru, N., D’Amico, F. (2014). Response of planktonic cladocerans (Class: Branchiopoda) to short-term changes in environmental variables in the surface waters of the Bay of Biscay. Deep Sea Research Part 2, 106, 87-98. DOI : 10.1016/j.dsr2.2013.09.030

Teichert, N., Valade, P., Fostier, A., Lagarde, R., Gaudin, P. (2014). Reproductive biology of an amphidromous goby, Sicyopterus lagocephalus, in La Réunion Island. Hydrobiologia, 726 (1), 123-141. DOI : 10.1007/s10750-013-1756-6

Perrier, C., Le Gentil, J., Ravigné, V., Gaudin, P., Salvado, J.-C. (2014). Origins and genetic diversity among Atlantic salmon recolonizing upstream areas of a large South European river following restoration of connectivity and stocking. Conservation Genetics, 15 (5), 1095-1109. DOI : 10.1007/s10592-014-0602-3

Massiot-Granier, F., Prévost, E., Chaput, G., Potter, T., Smith, G., White, J., Mäntyniemi, S., Rivot, E. (2014). Embedding stock assessment within an integrated hierarchical Bayesian life cycle modelling framework : an application to Atlantic salmon in the Northeast Atlantic. ICES Journal of Marine Science, 71 (7), 1653-1670. DOI : 10.1093/icesjms/fst240

Cattaneo, F., Grimardias, D., Carayon, M., Persat, H., Bardonnet, A. (2014). A multidimensional typology of riverbank habitats explains the disribution of European grayling (thymallus thymallus L.) fry in a temperate river. Ecology of Freshwater Fish, 23 (4), 527-543. DOI : 10.1111/eff.12106

Lepais, O. (Auteur de correspondance), Bacles, C. F. E. (2014). Two are better than one: combining landscape genomics and common gardens for detecting local adaptation in forest trees. Molecular Ecology, 23 (19), 4671-4673. DOI : 10.1111/mec.12906

Gouraud, V., Baran, P., Bardonnet, A., Beaufrère, C., Capra, H., Caudron, A., Delacoste, M., Lascaux, J., Naura, M., Ovidio, M., Poulet, N., Tissot, L., Sabaton, C., Baglinière, J.-L. (2014). Sur quelles connaissances se baser pour évaluer l’état de santé des populations de truite commune (Salmo trutta) ?. Hydroécologie Appliquée, 18, 111-138. DOI : 10.1051/hydro/2014001

Bal, G., Rivot, E., Baglinière, J.-L., White, J., Prévost, E. (2014). A hierarchical bayesian model to quantify uncertainty of stream water temperature forecasts. Plos One, 9 (12), e115659. DOI : 10.1371/journal.pone.0115659

Teichert, N., Valade, P., Lim, P., Dauba, F., Labonne, J., Richarson, M., Bosc, P., Gaudin, P. (2014). Habitat selection in amphidromous Gobiidae of Reunion Island : Sicyopterus lagocephalus (Pallas, 1770) and Cotylopus acutipinnis (Guichenot, 1863). Environmental Biology of Fishes, 97 (3), 255-266. DOI : 10.1007/s10641-013-0148-0

Gasmi, S., Ferval, M., Pelissier, C., D’Amico, F., Maris, T., Tackx, M., Legal, L. (2014). Genetic diversity among the Eurytemora affinis species complex in the Scheldt estuary and its tributaries using ISSR-PCR marker assay. Estuarine Coastal and Shelf Science, 145, 22-30. DOI : 10.1016/j.ecss.2014.04.005

Lepais, O., Weir, J. T. (2014). SimRAD: an R package for simulation-based prediction of the number of loci expected in RADseq and similar genotyping by sequencing approaches. Molecular Ecology Resources, 14 (6), 1314-1321. DOI : 10.1111/1755-0998.12273

Geffroy, B., Bru, N., Dossou-Gbete, S., Tentelier, C., Bardonnet, A. (2014). The link between social network density and rank-order consistency of aggressiveness in juvenile eels. Behavioral Ecology and Sociobiology, 68 (7), 1073-1083. DOI : 10.1007/s00265-014-1719-6

2013 :

Navarro, P., Clemens, S., Perrot, V., Bolliet, V., Tabouret, H., Guerin, T., Monperrus, M., Amouroux, D. (2013). Simultaneous determination of mercury and butyltin species using a multiple species-specific isotope dilution methodology on the European, Anguilla anguilla glass eel and yellow eel. International Journal of Environmental Analytical Chemistry, 93 (2), 166-182. DOI : 10.1080/03067319.2011.629349

Gaither, M. R., Aeby, G., Vignon, M., Meguro, Y.-i., Rigby, M., Runyon, C., Toonen, R. J., Wood, C. L., Bowen, B. W. (2013). An invasive fish and the time-lagged spread of its parasite across the Hawaiian archipelago. Plos One, 8 (2), 9 p.

Castege, I., Soulier, L., Hemery, G., Mouches, C., Lalanne, Y., Dewez, A., Pautrizel, F., d’Elbée, J., D’Amico, F. (2013). Exploring cetacean stranding pattern in light of variation in at-sea encounter rate and fishing activity : lessons from time surveys in the south Bay of Biscay (East-Atlantic; France). Journal of Marine Systems, 109-110, S284-S292. DOI : 10.1016/j.jmarsys.2012.04.007

Magda, D. (Auteur de correspondance), Gleizes, B., Jarry, M. (2013). Maternal effect on seed survival and emergence in Cytisus scoparius: an experimental approach. Ecological Research, 28 (6), 927-934. DOI : 10.1007/s11284-013-1075-4

Dodson, J., Sirois, P., Daigle, G., Gaudin, P., Bardonnet, A. (2013). Otolith microstructure during the early life-history stages of brown trout : validation and interpretation. North American Journal of Fisheries Management, 33 (1), 108-116. DOI : 10.1080/02755947.2012.746245

Dauphin, G., Brugel, C., Hoffmann-Legrand, M., Prévost, E. (2013). Estimating spatial distribution of Atlantic salmon escapement using redd counts despite changes over time in counting procedure : application to the Allier River population. Ecology of Freshwater Fish, 22 (4), 626-636. DOI : 10.1111/eff.12067

Teichert, N., Keith, P., Valade, P., Richarson, M., Metzger, M., Gaudin, P. (2013). Breeding pattern and nest guarding in Sicyopterus lagocephalus, a widespread amphidromous Gobiidae. Journal of Ethology, 31 (3), 239-247. DOI : 10.1007/s10164-013-0372-2

Lepais, O., Muller, S. D., Ben Saad-Limam, S., Benslama, M., Rhazi, L., Belouahem-Abed, D., Daoud-Bouattour, A., Mokhtar Gammar, A., Ghrabi-Gammar, Z., Bacles, C. F. (2013). High genetic diversity and distinctiveness of rear-edge climate relicts maintained by ancient tetraploidisation for Alnus glutinosa. Plos One, 8 (9), 11 p. DOI : 10.1371/journal.pone.0075029

Geffroy, B., Guiguen, Y., Fostier, A., Bardonnet, A. (2013). New insights regarding gonad development in European eel : evidence for a direct ovarian differentiation. Fish Physiology and Biochemistry, 39 (5), 1129-1140. DOI : 10.1007/s10695-013-9769-7

Labonne, J., Vignon, M., Prévost, E., Lecomte, F., Dodson, J., Kaeuffer, R., Aymes, J.-C., Jarry, M., Gaudin, P., Davaine, P., Beall, E. (2013). Invasion dynamics of a fish-free landscape by brown trout (Salmo trutta). Plos One, 8 (8), 7 p. DOI : 10.1371/journal.pone.0071052

Régnier, T., Bolliet, V., Gaudin, P., Labonne, J. (2013). Bigger is not always better : egg size influences survival throughout incubation in brown trout (Salmo trutta). Ecology of Freshwater Fish, 22 (2), 169-177. DOI : 10.1111/eff.12018

Lepais, O. (Auteur de correspondance), Roussel, G., François, H., Kremer, A., Gerber, S. (2013). Strength and variability of postmating reproductive isolating barriers between four European white oak species. Tree Genetics and Genomes, 9 (3), 841-853. DOI : 10.1007/s11295-013-0602-3

TEICHERT, N., Valade, P., Bosc, P., Richarson, M., Gaudin, P. (2013). Spawning-habitat selection of an Indo-Pacific amphidromous gobiid fish, Sicyopterus lagocephalus (Pallas). Marine and Freshwater Research, 64 (11), 1058 – 1067. DOI : 10.1071/MF13035

Lecomte, F., Beall, E., Chat, J., Davaine, P., Gaudin, P. (2013). The complete history of salmonid introductions in the Kerguelen Islands, Southern Ocean. Polar Biology, 36 (4), 457-475. DOI : 10.1007/s00300-012-1281-5

Martin, J., Bareille, G., Berail, S., Pecheyran, C., Gueraud, F., Lange, F., Daverat, F., Bru, N., Beall, E., Barracou, D., Donard, O. (2013). Persistence of a southern Atlantic salmon population : diversity of natal origins from otolith elemental and Sr isotopic signatures. Canadian Journal of Fisheries and Aquatic Sciences, 70 (2), 182-197. DOI : 10.1139/cjfas-2012-0284

Piou, C., Prévost, E. (2013). Contrasting effects of climate change in continental vs. oceanic environments on population persistence and microevolution of Atlantic salmon. Global Change Biology, 19 (3), 711-723. DOI : 10.1111/gcb.12085

2012 :

Vignon, M. (2012). Ontogenic trajectories of otolith shape during shift in habitat use : interaction between otolith growth and environment. Journal of Experimental Marine Biology and Ecology, 420-421, 26-32. DOI : 10.1016/j.jembe.2012.03.021

Geffroy, B., Bardonnet, A. (2012). Differential effects of behaviour, propensity to migrate and recruitment season on glass eels and elvers’growing performance. Ecology of Freshwater Fish, 21 (3), 469-482. DOI : 10.1111/j.1600-0633.2012.00566.x

Bried, J. T., D’Amico, F., Samways, M. J. (2012). A critique of the dragonfly delusion hypothesis : why sampling exuviae does not avoid bias. Insect Conservation and Diversity, 5, 398-402. DOI : 10.1111/j.1752-4598.2011.00171.x

Rotheray, E., Lepais, O., Nater, A., Krützen, M., Greminger, M., Goulson, D., Bussière, L. (2012). Genetic variation and population decline of an endangered hoverfly Blera fallax (Diptera : Syrphidae). Conservation Genetics, 13 (5), 1283-1291. DOI : 10.1007/s10592-012-0371-9

Régnier, T., Bolliet, V., Gaudin, P., Labonne, J. (2012). Female effects on offspring energetic status and consequences on early development in yolk feeding brown trout (Salmo trutta). Journal of Experimental Zoology. Part A, Ecological Genetics and Physiology, 317A (6), 347-358. DOI : 10.1002/jez.1728

Darvill, B., Lepais, O., Woodall, L., Goulson, D. (2012). Triploid bumblebees indicate a direct cost of inbreeding in fragmented populations. Molecular Ecology, 21 (16), 3988-3995. DOI : 10.1111/j.1365-294X.2012.05679.x

Acolas, M.-L., Labonne, J., Baglinière, J.-L., Roussel, J.-M. (2012). The role of body size versus growth on the decision to migrate : a case study with Salmo trutta. Naturwissenschaften, 99 (1), 11-21. DOI : 10.1007/s00114-011-0861-5

Buoro, M., Prévost, E., Gimenez, O. (2012). Digging through model complexity : using hierarchical models to uncover evolutionary processes in the wild. Journal of Evolutionary Biology, 25 (10), 2077-2090. DOI : 10.1111/j.1420-9101.2012.02590.x

Teichert, N., Richarson, M., Valade, P., Gaudin, P. (2012). Reproduction and marine life history of an endemic amphidromous gobiid fish of Reunion Island. Aquatic Biology, 15 (3), 225-236. DOI : 10.3354/ab00420

Williams-Tripp, M., d’Amico, F., Pagé, C., Bertrand, A., Némoz, M., Brown, J. (2012). Modeling rare species distribution at the edge : the case for the vulnerable endemic pyrenean desman in France. Scientific World Journal, 2012, 6 p. DOI : 10.1100/2012/612965

Piou, C., Prévost, E. (2012). A demo-genetic individual-based model for Atlantic salmon populations : model structure, parameterization and sensitivity. Ecological Modelling, 231, 37-52. DOI : 10.1016/j.ecolmodel.2012.01.025

Caill-Milly, N., Bru, N., Mahé, K., D’Amico, F. (2012). Shell shape analysis and spatial allometry patterns of Manila Clam (Ruditapes philippinarium) in a mesotidal coastal lagoon. Journal of Marine Biology, 11 p. DOI : 10.1155/2012/281206

Viscosi, V., Antonecchia, G., Lepais, O., Fortini, P., Gerber, S., Loy, A. (2012). Leaf shape and size differentiation in white oaks : assessment of allometric relationships among three sympatric species and their hybrids. International Journal of Plant Sciences, 173 (8), 875-884. DOI : 10.1086/667234

Régnier, T., Labonne, J., Gaudin, P., Bolliet, V. (2012). Influence of energetic status on ontogenetic niche shifts : emergence from the redd is linked to metabolic rate in brown trout. Oecologia, 168 (2), 371-380. DOI : 10.1007/s00442-011-2109-7

Schroder, S.L., Knudsen, C.M., Pearsons, T.N., Kassler, T.W., Beall, E., Young, S.F., Fast, D.E. (2012). Breeding success of four male life history types of spring Chinook Salmon spawning in an artificial stream. Environmental Biology of Fishes, 94 (1), 231-248. DOI : 10.1007/s10641-011-9789-z

Chat, J., Manicki, A. (2012). A SNP-based assay in a non model species : evolutionary lineage assignment of brown trout ancient DNA. Conservation Genetics Resources, 4 (1), 59-62. DOI : 10.1007/s12686-011-9474-8

Geffroy, B., Fostier, A., Guiguen, Y., Bardonnet, A. (2012). Unusual cases of adult intersexuality in the European eel Anguilla anguilla. Sexual Development, 6 (6), 316-319. DOI : 10.1159/000343781

Buoro, M., Gimenez, O., Prévost, E. (2012). Assessing adaptive phenotypic plasticity by means of conditional strategies from empirical data : the latent environmental threshold model. Evolution, 66 (4), 996-1009. DOI : 10.1111/j.1558-5646.2011.01484.x

Da Silveira Pontes, L., Magda, D. (Auteur de correspondance), Jarry, M., Gleizes, B., Agreil, C. (2012). Shrub encroachment control by browsing: Targeting the right demographic process. Acta Oecologica, 45, 25-30. DOI : 10.1016/j.actao.2012.08.006

Renou, M., Thiery, D., Pajot, E., Nielsen, B., Keller, M., Hewison, M., Labonne, J., Maurel, M.-C., Fabre-Nys, C., Blesbois, E., Beall, E., Estoup, A., Facon, B. (2012). Histoires de rencontres amoureuses. La reproduction et les comportements sexuels animaux vus par l’Inra. Presse Informations – INRA, 15 p.

Burnel, L., Angibault, J.-M., Azam, D., Bernier, F., Carrère, P., Courdier, F., Fontaine, S., Gaudin, P., Gigleux, J.-M., Marchand, F., Verger, M., Hoch, D. (2012). Bilan et perspectives des deux écoles techniques « notions et techniques en écologie » organisées par le Département EFPA. Cahier des Techniques de l’INRA, 75 (1), 11 p.

2011 :

Vignon, M. (2011). Putting in shape – towards a unified approach for the taxonomic description of monogenean haptoral hard parts. Systematic Parasitology, 79 (3), 161-174. DOI : 10.1007/s11230-011-9303-1

Horreo, J. L., Martinez, J. L., Ayllon, F., Pola, I. G., Monteoliva, J. A., Héland, M., Garcia-Vazquez, E. (2011). Impact of habitat fragmentation on the genetics of populations in dendritic landscapes. Freshwater Biology, 56 (12), 2567-2579. DOI : 10.1111/j.1365-2427.2011.02682.x

Jaffal, A., Paris-Palacios, S., Jolly, S., Thailly, A.F., Delahaut, L., Beall, E., Roche, H., Biagianti-Risbourg, S., Betoullle, S. (2011). Cadmium and copper contents in a freshwater fish species (brook trout, Salvelinus fontinalis) from the subantarctic Kerguelen Islands. Polar Biology, 34 (3), 397-409. DOI : 10.1007/s00300-010-0895-8

Vignon, M., Dierking, J. (2011). Prey regurgitation and stomach vacuity among groupers and snappers. Environmental Biology of Fishes, 90 (4), 361-366. DOI : 10.1007/s10641-010-9746-2

Vignon, M., Pariselle, A., Vanhove, M. (2011). Modularity in attachment organs of African Cichlidogyrus (Platyhelminthes: Monogenea: Ancyrocephalidae) reflects phylogeny rather than host specificity or geographic distribution. Biological Journal of the Linnean Society, 102 (3), 694-706. DOI : 10.1111/j.1095-8312.2010.01607.x

Delcourt, J., Ylieff, M., Bolliet, V., Poncin, P., Bardonnet, A. (2011). Video tracking in the extreme : a new possibility for tracking nocturnal underwater transparent animals with fluorescent elastomer tags. Behavior Research Methods, 43 (2), 590-600. DOI : 10.3758/s13428-011-0060-5

Jaffal, A., Givaudan, N., Betoulle, S., Terreau, A., Paris-Palacios, S., Biaganti-Risbourg, S., Beall, E., Roche, H. (2011). Polychlorinated biphenyls in freshwater salmonids from the Kerguelen Islands in the Southern Ocean. Environmental Pollution, 159 (5), 1381-1389. DOI : 10.1016/j.envpol.2011.01.003

Tentelier, C., Piou, C. (2011). Obstacles to migration constrain nest distribution of Atlantic salmon. Ecology of Freshwater Fish, 20 (3), 400-408. DOI : 10.1111/j.1600-0633.2010.00452.x

Tentelier, C. (Auteur de correspondance), Larrieu, M., Aymes, J.-C., Labonne, J. (2011). Male antagonistic behaviour after spawning suggests paternal care in brown trout, Salmo trutta L. Ecology of Freshwater Fish, 20 (4), 580-287. DOI : 10.1111/j.1600-0633.2011.00507.x

Goni, N., Logan, J., Arrizabalaga, H., Jarry, M., Lutcavage, M. (2011). Variability of albacore (Thunnus alalunga) diet in the Northeast Atlantic and Mediterranean Sea. Marine Biology, 158 (5), 1057-1073. DOI : 10.1007/s00227-011-1630-x

Charmantier, A., Buoro, M., Gimenez, O., Weimerskirch, H. (2011). Heritability of short-scale natal dispersal in a large-scale foraging bird, the wandering albatross. Journal of Evolutionary Biology, 24 (7), 1487-1496. DOI : 10.1111/j.1420-9101.2011.02281.x

Bureau Du Colombier, S., Bolliet, V., Lambert, P., Bardonnet, A. (2011). Metabolic loss of mass in glass eels at different salinities according to their propensity to migrate. Estuarine Coastal and Shelf Science, 93 (1), 1-6. DOI : 10.1016/j.ecss.2011.02.021

Gaucherel, C., Salomon, L., Labonne, J. (2011). Variable self-similar sinuosity properties within simulated river networks. Earth Surface Processes and Landforms, 36 (10), 1313-1320. DOI : 10.1002/esp.2153

Vignon, M. (2011). Inference in morphological taxonomy using collinear data and small sample sizes : Monogenean sclerites (Platyhelminthes) as a case study. Zoologica Scripta, 40 (3), 306-316. DOI : 10.1111/j.1463-6409.2011.00470.x

Horreo, J.L., Ayllon, F., Perez, J., Beall, E., Garcia-Vazquez, E. (2011). Interspecific hybridization, a matter of pioneering ? Insights from Atlantic salmon and brown trout. Journal of Heredity, 102 (2), 237-242. DOI : 10.1093/jhered/esq130

Dauphin, G., Prévost, E. (2011). Viabilité de la population naturelle de saumon Atlantique de l’Allier. Paroles de Migrateurs (5), 6.

Bal, G., Rivot, E., Prévost, E., Piou, C., Baglinière, J.-L. (2011). Effect of water temperature and density of juvenile salmonids on growth of young-of-the-year Atlantic salmon Salmo salar. Journal of Fish Biology, 78 (4), 1002-1022. DOI : 10.1111/j.1095-8649.2011.02902.x

Brun, M., Abraham, C. (Auteur de correspondance), Jarry, M., Dumas, J., Lange, F., Prévost, E. (2011). Estimating an homogeneous series of a population abundance indicator despite changes in data collection procedure : a hierarchical Bayesian modelling approach. Ecological Modelling, 222 (15), 1069-1079. DOI :

2010 :

Labonne, J., Hendry, A.P. (2010). Natural and sexual selection giveth and taketh away reproductive barriers : models of population divergence in guppies. American Naturalist, 176 (1), 26-39. DOI : 10.1086/652992

Aymes, J.-C., Larrieu, M., Tentelier, C., Labonne, J. (2010). Occurrence and variation of egg cannibalism in brown trout Salmo trutta. Naturwissenschaften, 97 (4), 435-439. DOI : 10.1007/s00114-010-0656-0

Régnier, T., Bolliet, V., Labonne, J., Gaudin, P. (2010). Assessing maternal effects on metabolic rate dynamics along early development in brown trout (Salmo trutta): an individual-based approach. Journal of Comparative Physiology B Biochemical Systemic and Environmental Physiology, 180 (1), 25-31. DOI : 10.1007/s00360-009-0385-x

Schroder, S.L., Knudsen, C.M., Pearsons, T.N., Kassler, T.W., Young, S.F., Beall, E.P., Fast, D.E. (2010). Behavior and breeding success of wild and first-generation hatchery male spring Chinook salmon spawning in an artificial stream. Transactions of the American Fisheries Society, 139 (4), 989-1003. DOI : 10.1577/T08-143.1

Dufour, F., Arrizabalaga, H., Irigoien, X., Santiago, J. (2010). Climate impacts on albacore and bluefin tunas migrations phenology and spatial distribution. Progress in Oceanography, 86 (1-2), 283-290. DOI : 10.1016/j.pocean.2010.04.007

Grimardias, D., Merchermek, N., Manicki, A., Garnier, J., Gaudin, P., Jarry, M., Beall, E. (2010). Reproductive success of Atlantic salmon (Salmo salar) mature male parr in a small river, the Nivelle : influence of shelters. Ecology of Freshwater Fish, 19 (4), 510-519. DOI : 10.1111/j.1600-0633.2010.00421.x

Dauphin, G., Prévost, E., Adams, C.E., Boylan, P. (2010). Using redd counts to estimate salmonids spawner abundances : a bayesian modelling approach. Fisheries Research, 106 (1), 32-40. DOI : 10.1016/j.fishres.2010.06.014

Valiente, A.G., Beall, E., Garcia-Vazquez, E. (2010). Population genetics of south European Atlantic salmon under global change. Global Change Biology, 16 (1), 36-47. DOI : 10.1111/j.1365-2486.2009.01922.x

Imbert, H., Labonne, J., Rigaud, C., Lambert, P. (2010). Resident and migratory tactics in freshwater European eels are size-dependent. Freshwater Biology, 55 (7), 1483-1493. DOI : 10.1111/j.1365-2427.2009.02360.x

Folcher, L., Delos, M., Jarry, M., Weissenberger, A., Eychenne, N., Regnault-Roger, C. (2010). Lower mycotoxin levels in Bt maize grain. Agronomy for Sustainable Development, 30 (4), 711-719. DOI : 10.1051/agro/2010005

Castillo, A.G.F., Beall, E., Moran, P., Martinez, J.L., Garcia-Vazquez, E. (2010). Indirect benefits for female salmon mating with brown trout. Journal of Heredity, 101 (4), 461-468. DOI : 10.1093/jhered/esq042

Vignon, M., Morat, F. (2010). Environmental and genetic determinant of otolith shape revealed by a non-indigenous tropical fish. Marine Ecology Progress Series, 411, 231-241. DOI : 10.3354/meps08651

Launey, S., Brunet, G., Guyomard, R., Davaine, P. (2010). Role of Introduction History and Landscape in the Range Expansion of Brown Trout (Salmo trutta L.) in the Kerguelen Islands. Journal of Heredity, 101 (3), 270-283. DOI : 10.1093/jhered/esp130

Buoro, M., Prévost, E., Gimenez, O. (2010). Investigating evolutionary trade-offs in wild populations of Atlantic salmon (Salmo salar) : incorporating detection probabilities and individual heterogeneity. Evolution, 64 (9), 2629-2642. DOI : 10.1111/j.1558-5646.2010.01029.x

Grimardias, D., Merchermek, N., Manicki, A., Chebaux, J., Gaudin, P., Jarry, M., Beall, E. (2010). Effects of habitat on individual reproductive success of mature male parr of Atlantic salmon Salmo salar. Journal of Fish Biology, 77 (10), 2460-2466. DOI : 10.1111/j.1095-8649.2010.02808.x